| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045860
Identifier: 78045860
GI number: 78045860
Start: 348865
End: 350286
Strand: Reverse
Name: 78045860
Synonym: XCV0304
Alternate gene names: NA
Gene position: 350286-348865 (Counterclockwise)
Preceding gene: 78045861
Following gene: 78045859
Centisome position: 6.76
GC content: 67.93
Gene sequence:
>1422_bases ATGAGCCTGGCCCACCTCGAACGTACCCTCGCCCACGACCTGCAATGCCTGGCCCACGGCGGCGATGCCTGGGTGCAACC GCGCGTGCATCCGAGCGGGCACGTCTACGACGTCATCATCGTCGGCGCCGGGCAGAGCGGCCTGGGGGCGGCGTTCGCGC TGCAACGCGAGCGTGTGCACAACCTGCTGGTGATCGACGAAAACCCGGCGGGCCAGGAAGGTCCGTGGGTGACCTACGCG CGCATGCAGACCTTGCGCACGCCCAAGCACATCACCTCGATCGATCTGGGCGTGCCATCGCTCACCTTCCGCGCGTGGTG GGAGGCGCAGTACGGCAGCGCCGCATGGGATGCGCTGGACAAGATTCCGCGCGCGCGCTGGATGGATTATCTGCGCTGGT ATCGCACAACGCTGCGCTTGCCGGTGCGCAACGCCACCCGCCTGGTCCGCGTGGAGCCGGACTTCGCACCGGGTATCCAT CGCCTGCATCTGGCGATGGGCGCCCCCCTGCTCACGCGCAAACTGATTCTGGCCACCGGCATCCAGGGCGGGGGCCAGTG GGTGGTGCCCGAGTGGATCAGCCGCGCCCTGCCCGCGCACCGCTACGCGCACACGTCCGGCCAGATCGATTTCGCCGCAC TGGCCGGCAAGCGTGTGGGCATTCTGGGCGGCGGCGCCTCGGCCTTCGACAATGCCTGCTTTGCGCTCGAACAAGGCCTC GCCAGTGCCGAGGTGTTCGTGCGGCGTAGCGAATTGCCGCGCATCAATCCGTTCCGGCACATGGAACAGGCCGGCATCAT TCCGCGTTTTCTGGCGCTGCCGGATGCAGACAAGTATCGGATGATGGCCAGCTTCTTCGCGCACAACCAACCGCCCACCA ACGACACCTTCCAGCGCGCCTGTGCGCATGCCGGCTTCGCGCTGCATCTTGGCGCGCCGTGGCTGGACGTGGCCGAACGC GATGGCGAGATCGTCGTGCGCACGCCGCAGCGCGAACACCGCTTCGATTTCCTTGCCATCGCCACCGGCCTGGTCACCGA TCCGCAGCTGCGTCCGGAACTGGCTGCGCTGTCCGGGCGCATCGCCTGCTGGGGCGACCGCTATCGGCCACCGCCGGGCC AGGCCAATCCGGTGCTGGACGCACACCCCTATCTGGGACCTGGCTTCGAACTGCTGCCACGCACGCCTGACGATGCCGCG CTGCTGCACGGGTTGTTCGCCTTCAACTATTCGGCGCTGATCAATCACGGCCCATCGGCCGCCGCGCTGTCCGGGCTGAA GGTGGCGCTGCCGCGGCTGGCCCGCGCAGTGGCCGACCAGTTGTTCCTGGACGACCGCCAGGCCATCGTCGACAGCTACC TGGCCTACGACCAACCCGAATTCGTCGGCCAATGGCCGCAACCCACCCAGGCAGTGGCATGA
Upstream 100 bases:
>100_bases CCGCGCTGGCGCAGCGGCTGGAGGCCGCGCGCAATGCAGAGATCGCCACCGCCATCGCCGAAATCGGCAAGATCGTTCAC CTGCGCCTGGAGGCACTGCC
Downstream 100 bases:
>100_bases GCACGCTGTCCACGCACGTGCTGGACACCGCCAGCGGCCGCCCCGCCGCGGGCGTGCCGCTGCGGCTGTTCGCCGGCGAG ACGCTGCACTTCGAGGGTGT
Product: putative oxidoreductase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase Protein; Monooxygenase; FAD-Dependent Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Oxidoreductase Protein; Monoxygenase; Truncated Monoxygenase; Oxidoreductase/Monooxygenase; Transmembrane Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Flavoprotein Involved In K+ Transport COG; Fad-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Protein AegA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSLAHLERTLAHDLQCLAHGGDAWVQPRVHPSGHVYDVIIVGAGQSGLGAAFALQRERVHNLLVIDENPAGQEGPWVTYA RMQTLRTPKHITSIDLGVPSLTFRAWWEAQYGSAAWDALDKIPRARWMDYLRWYRTTLRLPVRNATRLVRVEPDFAPGIH RLHLAMGAPLLTRKLILATGIQGGGQWVVPEWISRALPAHRYAHTSGQIDFAALAGKRVGILGGGASAFDNACFALEQGL ASAEVFVRRSELPRINPFRHMEQAGIIPRFLALPDADKYRMMASFFAHNQPPTNDTFQRACAHAGFALHLGAPWLDVAER DGEIVVRTPQREHRFDFLAIATGLVTDPQLRPELAALSGRIACWGDRYRPPPGQANPVLDAHPYLGPGFELLPRTPDDAA LLHGLFAFNYSALINHGPSAAALSGLKVALPRLARAVADQLFLDDRQAIVDSYLAYDQPEFVGQWPQPTQAVA
Sequences:
>Translated_473_residues MSLAHLERTLAHDLQCLAHGGDAWVQPRVHPSGHVYDVIIVGAGQSGLGAAFALQRERVHNLLVIDENPAGQEGPWVTYA RMQTLRTPKHITSIDLGVPSLTFRAWWEAQYGSAAWDALDKIPRARWMDYLRWYRTTLRLPVRNATRLVRVEPDFAPGIH RLHLAMGAPLLTRKLILATGIQGGGQWVVPEWISRALPAHRYAHTSGQIDFAALAGKRVGILGGGASAFDNACFALEQGL ASAEVFVRRSELPRINPFRHMEQAGIIPRFLALPDADKYRMMASFFAHNQPPTNDTFQRACAHAGFALHLGAPWLDVAER DGEIVVRTPQREHRFDFLAIATGLVTDPQLRPELAALSGRIACWGDRYRPPPGQANPVLDAHPYLGPGFELLPRTPDDAA LLHGLFAFNYSALINHGPSAAALSGLKVALPRLARAVADQLFLDDRQAIVDSYLAYDQPEFVGQWPQPTQAVA >Mature_472_residues SLAHLERTLAHDLQCLAHGGDAWVQPRVHPSGHVYDVIIVGAGQSGLGAAFALQRERVHNLLVIDENPAGQEGPWVTYAR MQTLRTPKHITSIDLGVPSLTFRAWWEAQYGSAAWDALDKIPRARWMDYLRWYRTTLRLPVRNATRLVRVEPDFAPGIHR LHLAMGAPLLTRKLILATGIQGGGQWVVPEWISRALPAHRYAHTSGQIDFAALAGKRVGILGGGASAFDNACFALEQGLA SAEVFVRRSELPRINPFRHMEQAGIIPRFLALPDADKYRMMASFFAHNQPPTNDTFQRACAHAGFALHLGAPWLDVAERD GEIVVRTPQREHRFDFLAIATGLVTDPQLRPELAALSGRIACWGDRYRPPPGQANPVLDAHPYLGPGFELLPRTPDDAAL LHGLFAFNYSALINHGPSAAALSGLKVALPRLARAVADQLFLDDRQAIVDSYLAYDQPEFVGQWPQPTQAVA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52149; Mature: 52018
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAHLERTLAHDLQCLAHGGDAWVQPRVHPSGHVYDVIIVGAGQSGLGAAFALQRERVH CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHC NLLVIDENPAGQEGPWVTYARMQTLRTPKHITSIDLGVPSLTFRAWWEAQYGSAAWDALD EEEEECCCCCCCCCCEEEHHHHHHHCCCCHHCEEECCCCCCEEEEEECCCCCCHHHHHHH KIPRARWMDYLRWYRTTLRLPVRNATRLVRVEPDFAPGIHRLHLAMGAPLLTRKLILATG HCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHC IQGGGQWVVPEWISRALPAHRYAHTSGQIDFAALAGKRVGILGGGASAFDNACFALEQGL CCCCCCEECHHHHHHCCCHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCC ASAEVFVRRSELPRINPFRHMEQAGIIPRFLALPDADKYRMMASFFAHNQPPTNDTFQRA HHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHH CAHAGFALHLGAPWLDVAERDGEIVVRTPQREHRFDFLAIATGLVTDPQLRPELAALSGR HHHCCEEEEECCCCHHHHCCCCCEEEECCCHHHCCEEEEEHHCCCCCCCCCHHHHHHCCC IACWGDRYRPPPGQANPVLDAHPYLGPGFELLPRTPDDAALLHGLFAFNYSALINHGPSA EEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH AALSGLKVALPRLARAVADQLFLDDRQAIVDSYLAYDQPEFVGQWPQPTQAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHCCC >Mature Secondary Structure SLAHLERTLAHDLQCLAHGGDAWVQPRVHPSGHVYDVIIVGAGQSGLGAAFALQRERVH CHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHC NLLVIDENPAGQEGPWVTYARMQTLRTPKHITSIDLGVPSLTFRAWWEAQYGSAAWDALD EEEEECCCCCCCCCCEEEHHHHHHHCCCCHHCEEECCCCCCEEEEEECCCCCCHHHHHHH KIPRARWMDYLRWYRTTLRLPVRNATRLVRVEPDFAPGIHRLHLAMGAPLLTRKLILATG HCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHC IQGGGQWVVPEWISRALPAHRYAHTSGQIDFAALAGKRVGILGGGASAFDNACFALEQGL CCCCCCEECHHHHHHCCCHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCC ASAEVFVRRSELPRINPFRHMEQAGIIPRFLALPDADKYRMMASFFAHNQPPTNDTFQRA HHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHH CAHAGFALHLGAPWLDVAERDGEIVVRTPQREHRFDFLAIATGLVTDPQLRPELAALSGR HHHCCEEEEECCCCHHHHCCCCCEEEECCCHHHCCEEEEEHHCCCCCCCCCHHHHHHCCC IACWGDRYRPPPGQANPVLDAHPYLGPGFELLPRTPDDAALLHGLFAFNYSALINHGPSA EEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH AALSGLKVALPRLARAVADQLFLDDRQAIVDSYLAYDQPEFVGQWPQPTQAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA