| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045835
Identifier: 78045835
GI number: 78045835
Start: 324289
End: 324600
Strand: Reverse
Name: 78045835
Synonym: XCV0279
Alternate gene names: NA
Gene position: 324600-324289 (Counterclockwise)
Preceding gene: 78045836
Following gene: 78045834
Centisome position: 6.27
GC content: 68.91
Gene sequence:
>312_bases ATGTCCAGCGCCTCGCCCCTGCCGCTTGCCTGGTTCAGGCGCCCCTGGCTGGGCGTGCTTGCGCGCACGCTGGCAGCCAT CTTCGGTGGCTACGCGCTGGCCAGCGCCACCAATCTGTTGCTGGCGCTGGTGCTGCCGATGCCGCGCAGTGAAGCGGTAT TGACCAGCATGCTGATCGGAATCGTGGTGTGCGCGTGTGCGCCGTTGTGGGCCTTCGCCACCGCCAGCGTGTGGCGTGCC TGGGCCGGCATCGCGGTGCCGGCGGCGTTGATGTTTGCGTTGGCCACGTGGCTGCAACGGAGCGCGGCATGA
Upstream 100 bases:
>100_bases GCCACACGCGGGAACCACTTGCGGTTGCCGGCCCACCCGGCTGGGCAACGTTGCGTTGCGGTATGGCGGTTGCCCCACGT CCATCGCGCGCGGTGGCGTG
Downstream 100 bases:
>100_bases AGCAGGGCTTTCGCCAATCGATGGCGTGGCTGCACACCTGGACCGGGCTGCTGGTCGGCTGGGTCTTGCTGCTGATCTTC ATGGGCGGCACGGCCAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSSASPLPLAWFRRPWLGVLARTLAAIFGGYALASATNLLLALVLPMPRSEAVLTSMLIGIVVCACAPLWAFATASVWRA WAGIAVPAALMFALATWLQRSAA
Sequences:
>Translated_103_residues MSSASPLPLAWFRRPWLGVLARTLAAIFGGYALASATNLLLALVLPMPRSEAVLTSMLIGIVVCACAPLWAFATASVWRA WAGIAVPAALMFALATWLQRSAA >Mature_102_residues SSASPLPLAWFRRPWLGVLARTLAAIFGGYALASATNLLLALVLPMPRSEAVLTSMLIGIVVCACAPLWAFATASVWRAW AGIAVPAALMFALATWLQRSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10870; Mature: 10739
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSASPLPLAWFRRPWLGVLARTLAAIFGGYALASATNLLLALVLPMPRSEAVLTSMLIG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVVCACAPLWAFATASVWRAWAGIAVPAALMFALATWLQRSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSASPLPLAWFRRPWLGVLARTLAAIFGGYALASATNLLLALVLPMPRSEAVLTSMLIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVVCACAPLWAFATASVWRAWAGIAVPAALMFALATWLQRSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA