| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045783
Identifier: 78045783
GI number: 78045783
Start: 266093
End: 266497
Strand: Reverse
Name: 78045783
Synonym: XCV0227
Alternate gene names: NA
Gene position: 266497-266093 (Counterclockwise)
Preceding gene: 78045784
Following gene: 78045782
Centisome position: 5.15
GC content: 55.56
Gene sequence:
>405_bases ATGGCTCATGGCTCCATTGCTGAGCAATGGGAAGGAGGTCTCCGGGAACTCCGACTTGTGCACCACAAGCCTGCTTCGCC AAACGCAGACCAAGGCGGCTGCTACCACGATGAGGCGTACTGGTTCGCCGCCAAGCGATACACGGTCAGCGATCTTCCCT TGACTTCCTTCGTTGGCCCCGATGGTTTGGTAACGTTGCTGGCGTTTCTCGCAGACCGTCGTTTCGCAGACCCAAATGAG GTCCTCGAATTGATCAAGCGTCTACATGTCCCAAACTATGAAGGGGCTCGGAACTCATTTGAGGCCGCGATAGCTGAAGG TGTGTTTGAGCCGCGTTCGACACCCGGGTACTACGATCAGCGCGAACTACTGGCAGTCTTGAACTGGATTAGCAACGAGC AGTAA
Upstream 100 bases:
>100_bases GAACAACCAAATCATCAGGAGGGCATATGGAAGCGAATCCACCATGGAAATGCGATCAATGCGGGCATCCGATCAACAGC GTTGAGGACGGCTGGGTTGA
Downstream 100 bases:
>100_bases GGGCAAATCAGTCAGTTCTATTTCGGGGCTTACCAGACAATAGAGCGACCCTCACCTCGAGATAAGCTTGAAAGAGGTGA TCCGGCGAGTAATCGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAHGSIAEQWEGGLRELRLVHHKPASPNADQGGCYHDEAYWFAAKRYTVSDLPLTSFVGPDGLVTLLAFLADRRFADPNE VLELIKRLHVPNYEGARNSFEAAIAEGVFEPRSTPGYYDQRELLAVLNWISNEQ
Sequences:
>Translated_134_residues MAHGSIAEQWEGGLRELRLVHHKPASPNADQGGCYHDEAYWFAAKRYTVSDLPLTSFVGPDGLVTLLAFLADRRFADPNE VLELIKRLHVPNYEGARNSFEAAIAEGVFEPRSTPGYYDQRELLAVLNWISNEQ >Mature_133_residues AHGSIAEQWEGGLRELRLVHHKPASPNADQGGCYHDEAYWFAAKRYTVSDLPLTSFVGPDGLVTLLAFLADRRFADPNEV LELIKRLHVPNYEGARNSFEAAIAEGVFEPRSTPGYYDQRELLAVLNWISNEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15072; Mature: 14941
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGSIAEQWEGGLRELRLVHHKPASPNADQGGCYHDEAYWFAAKRYTVSDLPLTSFVGP CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCC DGLVTLLAFLADRRFADPNEVLELIKRLHVPNYEGARNSFEAAIAEGVFEPRSTPGYYDQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH RELLAVLNWISNEQ HHHHHHHHHHCCCC >Mature Secondary Structure AHGSIAEQWEGGLRELRLVHHKPASPNADQGGCYHDEAYWFAAKRYTVSDLPLTSFVGP CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCC DGLVTLLAFLADRRFADPNEVLELIKRLHVPNYEGARNSFEAAIAEGVFEPRSTPGYYDQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH RELLAVLNWISNEQ HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA