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The map label for this gene is ylbK [H]

Identifier: 78045716

GI number: 78045716

Start: 191792

End: 192835

Strand: Reverse

Name: ylbK [H]

Synonym: XCV0160

Alternate gene names: 78045716

Gene position: 192835-191792 (Counterclockwise)

Preceding gene: 78045718

Following gene: 78045713

Centisome position: 3.72

GC content: 66.19

Gene sequence:

>1044_bases
ATGACCGCCTTTCCTAGCAAGTGCCTCCTGTTGTCCCTGTCCCTGTCACTGGCCGGGCTGCTCAGCGCCTGCGGGGGCGA
GCCACGCCCGGCGACACCGGCGCCGGTGGTGCAGGCACCTTCGGCCGCAGCCCCCAAGCCCATCAAGATCGGCGTCGCGC
TCGGTGGTGGTGCGGCCAAGGGCTTTGCGCATATCGGGGTGATCAAGATGCTCGAGGCCAACGGCTTCGCACCGGTGGTG
GTGTCTGGCACCAGCGCCGGCAGCGTGGTGGGCGCGTTGTATGCCAGCGGCATGGATGCGTTCCAAATGCAGGAAAAGGC
CGTCGCGCTCGACCAGACCAGCATCCGCGATGTGCGGCTGTTTTCCGGTGGGCTGGTGCAGGGCCAGAAGCTGCAGGACT
ACGTCAACGAGCAGCTCGGCGGCAAGCCGATCGAAAAACTGCGCAAGCCGTTCGCGGCGGTCGCCACGCGGCTGGAAGAT
GGCGAGCGTACCGTGTTCGTGCGCGGTAATGCCGGCCAGGCGGTACGCGCGTCCAGCAGCATTCCGGGTGTATTCGAACC
GGTGACCATCGGCAAATACCACTTCGTCGATGGTGGCGTGGTCAGCCCGGTGCCGGTGGATGCGGCGCGCCAGTTGGGTG
CCGAATTCGTGGTGGCGGTGGATATCTCCAGCAAGGCCAGCGGCAAGAATCCGGGGGACCTGCTGGGCACGGTGAACCAG
TCGATCTCGATCATGGGCCAGCGCCTGGGCGAGGCCGAACTCAAACGTGCCGACGTGGTCATTCGCCCGAAGGTCAACGA
GATCGGCTCGGCCGATTTCAACCAACGTGGTGCGGCGATCCTCGAAGGCGAGCGCGCCGCAATGGCGGTGATGCCGCAGA
TTCGCGCCAAGATTGCGCAACTGCAGGCCGCGCGCAGCAGCGCAGTCCGGACCGCCGCCGACCAGGCCAAAGCGGCCAAG
CAACAGGCGTACGAGCGCTGCCTGGAACAACGCTCGCGTTGGGAAAAATTGCGTGGCACGGATGAGGCCTGCGTGGCGCC
GTGA

Upstream 100 bases:

>100_bases
CGCATGACGCCCTGCCGCCCGCCGCCAATGCAGACCGGCGGCCAGGGCTGCGGCGTGTATGCTGCGCCGCTGTCCACATC
GCGCCCTGTGCACGCTCGCC

Downstream 100 bases:

>100_bases
GCCGGCTGCGCTGCGCTGGAGAAATGGATTGCGGCCGTATGCGGCCGTGGGCGGGGCGCACATGCACGCAAGGACTCCGC
CGGCGATGCCTGTCGCGCGC

Product: putative hydrolase precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTAFPSKCLLLSLSLSLAGLLSACGGEPRPATPAPVVQAPSAAAPKPIKIGVALGGGAAKGFAHIGVIKMLEANGFAPVV
VSGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFSGGLVQGQKLQDYVNEQLGGKPIEKLRKPFAAVATRLED
GERTVFVRGNAGQAVRASSSIPGVFEPVTIGKYHFVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQ
SISIMGQRLGEAELKRADVVIRPKVNEIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQAARSSAVRTAADQAKAAK
QQAYERCLEQRSRWEKLRGTDEACVAP

Sequences:

>Translated_347_residues
MTAFPSKCLLLSLSLSLAGLLSACGGEPRPATPAPVVQAPSAAAPKPIKIGVALGGGAAKGFAHIGVIKMLEANGFAPVV
VSGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFSGGLVQGQKLQDYVNEQLGGKPIEKLRKPFAAVATRLED
GERTVFVRGNAGQAVRASSSIPGVFEPVTIGKYHFVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQ
SISIMGQRLGEAELKRADVVIRPKVNEIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQAARSSAVRTAADQAKAAK
QQAYERCLEQRSRWEKLRGTDEACVAP
>Mature_346_residues
TAFPSKCLLLSLSLSLAGLLSACGGEPRPATPAPVVQAPSAAAPKPIKIGVALGGGAAKGFAHIGVIKMLEANGFAPVVV
SGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFSGGLVQGQKLQDYVNEQLGGKPIEKLRKPFAAVATRLEDG
ERTVFVRGNAGQAVRASSSIPGVFEPVTIGKYHFVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQS
ISIMGQRLGEAELKRADVVIRPKVNEIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQAARSSAVRTAADQAKAAKQ
QAYERCLEQRSRWEKLRGTDEACVAP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=232, Percent_Identity=32.3275862068966, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI260656041, Length=232, Percent_Identity=32.3275862068966, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI116256487, Length=232, Percent_Identity=32.3275862068966, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI260656043, Length=232, Percent_Identity=32.3275862068966, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI260656037, Length=232, Percent_Identity=32.3275862068966, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI148727335, Length=202, Percent_Identity=33.1683168316832, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI148727290, Length=202, Percent_Identity=33.1683168316832, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI226510936, Length=302, Percent_Identity=33.4437086092715, Blast_Score=144, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6323581, Length=259, Percent_Identity=28.957528957529, Blast_Score=86, Evalue=8e-18,
Organism=Drosophila melanogaster, GI28571388, Length=184, Percent_Identity=28.2608695652174, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281376913, Length=184, Percent_Identity=28.804347826087, Blast_Score=68, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36069; Mature: 35938

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFPSKCLLLSLSLSLAGLLSACGGEPRPATPAPVVQAPSAAAPKPIKIGVALGGGAAK
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHH
GFAHIGVIKMLEANGFAPVVVSGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRL
HHHHHHHHHEEECCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEE
FSGGLVQGQKLQDYVNEQLGGKPIEKLRKPFAAVATRLEDGERTVFVRGNAGQAVRASSS
ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCC
IPGVFEPVTIGKYHFVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQ
CCCCCCCEECCEEEEECCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHH
SISIMGQRLGEAELKRADVVIRPKVNEIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQ
HHHHHHHHHCHHHHHHCCEEECCCCHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
LQAARSSAVRTAADQAKAAKQQAYERCLEQRSRWEKLRGTDEACVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TAFPSKCLLLSLSLSLAGLLSACGGEPRPATPAPVVQAPSAAAPKPIKIGVALGGGAAK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHH
GFAHIGVIKMLEANGFAPVVVSGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRL
HHHHHHHHHEEECCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEE
FSGGLVQGQKLQDYVNEQLGGKPIEKLRKPFAAVATRLEDGERTVFVRGNAGQAVRASSS
ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCC
IPGVFEPVTIGKYHFVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQ
CCCCCCCEECCEEEEECCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHH
SISIMGQRLGEAELKRADVVIRPKVNEIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQ
HHHHHHHHHCHHHHHHCCEEECCCCHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
LQAARSSAVRTAADQAKAAKQQAYERCLEQRSRWEKLRGTDEACVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]