| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045694
Identifier: 78045694
GI number: 78045694
Start: 160354
End: 160842
Strand: Reverse
Name: 78045694
Synonym: XCV0138
Alternate gene names: NA
Gene position: 160842-160354 (Counterclockwise)
Preceding gene: 78045700
Following gene: 78045693
Centisome position: 3.11
GC content: 63.6
Gene sequence:
>489_bases ATGCAGACCGACAACGAGCATGTCCGCGAGTTGGCGCTAGCAGTGTTCGCGGCCAATGGCCGCTTGGTCAGCGCTGGCAA CGAGCTGGTTGCCCATCTGGGGCTCACCAGTGCGTGGTGGCAAGTGCTGGCCGCCCTGCGTTACGCACCAGCGCCGCTAC CCGCGGCTTCGATCGCGCGCAACATGGGCCTCACCCGGCAGGCAGTGCAGCGCATCGTGGATGTACTTGCCGAGCAGGGG CTTGTCGAGTTCCAGCCGAATCCCCATCACCTACGCGCCAAGCTCGTTGTCCTTACCCGCGCAGGCATCAAGGCCGTCAG CGGCGCCGAAAAGGCCGTTGCCCCCGTCGATCAAGCAATCGCGGACAAGATCGGCATCGATCGCATCCGCGATGCCGTCC GCACCCTTGAGGAGATGAGCGCTGTCATCTCGGAGTATCTGGGTGAAGCGCCCAGCGCTTCCAGTTCCATCGTCAAACTG CAGGAGTAA
Upstream 100 bases:
>100_bases GTAGCGAGCCATGTCTCGTAACCAGACCTTACGCTACACAATCACACGCAGCTCACTTTTCAATTGACAACATGTTGTCG ACTTGAGAAAGAGCCTTCGT
Downstream 100 bases:
>100_bases TGCAATCATGATTCTGGTATCAGGTGCCACGGGTGGTATCGGCGGCGAACTGTGCAAGCTCTTACAAGATGTCGCCACGC CATTCCGCGCGATGTGCCGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: MarR-Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcription Regulator Protein; Regulatory Protein MarR; Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MQTDNEHVRELALAVFAANGRLVSAGNELVAHLGLTSAWWQVLAALRYAPAPLPAASIARNMGLTRQAVQRIVDVLAEQG LVEFQPNPHHLRAKLVVLTRAGIKAVSGAEKAVAPVDQAIADKIGIDRIRDAVRTLEEMSAVISEYLGEAPSASSSIVKL QE
Sequences:
>Translated_162_residues MQTDNEHVRELALAVFAANGRLVSAGNELVAHLGLTSAWWQVLAALRYAPAPLPAASIARNMGLTRQAVQRIVDVLAEQG LVEFQPNPHHLRAKLVVLTRAGIKAVSGAEKAVAPVDQAIADKIGIDRIRDAVRTLEEMSAVISEYLGEAPSASSSIVKL QE >Mature_162_residues MQTDNEHVRELALAVFAANGRLVSAGNELVAHLGLTSAWWQVLAALRYAPAPLPAASIARNMGLTRQAVQRIVDVLAEQG LVEFQPNPHHLRAKLVVLTRAGIKAVSGAEKAVAPVDQAIADKIGIDRIRDAVRTLEEMSAVISEYLGEAPSASSSIVKL QE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17319; Mature: 17319
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDNEHVRELALAVFAANGRLVSAGNELVAHLGLTSAWWQVLAALRYAPAPLPAASIAR CCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH NMGLTRQAVQRIVDVLAEQGLVEFQPNPHHLRAKLVVLTRAGIKAVSGAEKAVAPVDQAI HCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHH ADKIGIDRIRDAVRTLEEMSAVISEYLGEAPSASSSIVKLQE HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC >Mature Secondary Structure MQTDNEHVRELALAVFAANGRLVSAGNELVAHLGLTSAWWQVLAALRYAPAPLPAASIAR CCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH NMGLTRQAVQRIVDVLAEQGLVEFQPNPHHLRAKLVVLTRAGIKAVSGAEKAVAPVDQAI HCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHH ADKIGIDRIRDAVRTLEEMSAVISEYLGEAPSASSSIVKLQE HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA