| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045646
Identifier: 78045646
GI number: 78045646
Start: 105632
End: 106450
Strand: Reverse
Name: 78045646
Synonym: XCV0090
Alternate gene names: NA
Gene position: 106450-105632 (Counterclockwise)
Preceding gene: 78045647
Following gene: 78045645
Centisome position: 2.06
GC content: 59.95
Gene sequence:
>819_bases GTGAGTAGGAGCCGGGAATCGGGAGTCGGGATTCGAGAATGGGAGAGCACAGCAGGCTCTCTGCATCCTGATACTTTTCC TGCACCTTCCGTTTCCGGTCTACGTCACTTGGCGGCGCCTGCGACGCGCCGCCACTTTCTCGGCCTGTTGCTCGGTAGCG TCGCTGCGTTGGCGCTGCCGCAGCGCGTGCGGGCGGCCGGCAATTACGATTTCTGGTTCACCCGGTTGCGCTACGACTCC GGCGATTGGGATGTGGACGCGCGCATGCCGTCCAATCTGATTACCTCGCTGATCGACTACACCCAGCTGCGGGTGGACCC GCAGGAACATGTGCTGGATCTGGCCGACCCGCGCATGTTGCAGGCGCCGTTCTGCTATCTGTCCGGTCACAAGCTGGTGG AGTTCAACCCGGCCGAGCGGCGCAACTTCGAGCGCTATGTGCGTAACGGCGGCTTCGTGTTCGTGGACGATTGCAACCAC GATATCGACGGTTTGTTCGCCACCTCCTTCGAAGCGCAGATGACCTCGATCTTCGGCAAGACGGCGTTGCAGAAACTGCC CAAGAACCATCGACTCTACAGCGCCTTCTTCACCTTCCCCGACGGCCCGCCGGCCACCGGTTTCGAACTCAATGGCTGGG GCGACGACCTGGTGCACGACTATCTCAAAGGCATCAGCATCGATGGCCGGCTCGGGGTGCTCTACAGCAACAAGGATTAC GGTTGCGAATGGGATTACGACTGGCGCAACAAGCGTTTTCTGGCCGAAGACAACACCAAGTTCGGCGTCAACATCGTGAT GTATGCATTGACCAATTGA
Upstream 100 bases:
>100_bases GCAAGCCGGTGCGCGTGGCTGGCGATGAATCCAACTTCGTGATGATGATTCCGCCGATGCGGCTGCGGGACTTTACGTTT ACTTCGTTGTCGGATGCGGT
Downstream 100 bases:
>100_bases TCGCCGCAGGGTGCTCGCCATGTCGAACCAGGCTTGCGCAATCAAGAATCACCGCTGAGGCCTCGCGCGCAAGCGCGCCG CGCATCAGCAACCATCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSRSRESGVGIREWESTAGSLHPDTFPAPSVSGLRHLAAPATRRHFLGLLLGSVAALALPQRVRAAGNYDFWFTRLRYDS GDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRMLQAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNH DIDGLFATSFEAQMTSIFGKTALQKLPKNHRLYSAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN
Sequences:
>Translated_272_residues MSRSRESGVGIREWESTAGSLHPDTFPAPSVSGLRHLAAPATRRHFLGLLLGSVAALALPQRVRAAGNYDFWFTRLRYDS GDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRMLQAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNH DIDGLFATSFEAQMTSIFGKTALQKLPKNHRLYSAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN >Mature_271_residues SRSRESGVGIREWESTAGSLHPDTFPAPSVSGLRHLAAPATRRHFLGLLLGSVAALALPQRVRAAGNYDFWFTRLRYDSG DWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRMLQAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNHD IDGLFATSFEAQMTSIFGKTALQKLPKNHRLYSAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDYG CEWDYDWRNKRFLAEDNTKFGVNIVMYALTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30843; Mature: 30712
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSRESGVGIREWESTAGSLHPDTFPAPSVSGLRHLAAPATRRHFLGLLLGSVAALALP CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QRVRAAGNYDFWFTRLRYDSGDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRML HHHHHCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH QAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNHDIDGLFATSFEAQMTSIFGK HCCEEEECCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHHH TALQKLPKNHRLYSAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY HHHHHCCCCCEEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCC GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN CCCCCCCCCCCEEEECCCCEECEEEEEEEECC >Mature Secondary Structure SRSRESGVGIREWESTAGSLHPDTFPAPSVSGLRHLAAPATRRHFLGLLLGSVAALALP CCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QRVRAAGNYDFWFTRLRYDSGDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRML HHHHHCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH QAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNHDIDGLFATSFEAQMTSIFGK HCCEEEECCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHHH TALQKLPKNHRLYSAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY HHHHHCCCCCEEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCC GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN CCCCCCCCCCCEEEECCCCEECEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA