| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045620
Identifier: 78045620
GI number: 78045620
Start: 76728
End: 77177
Strand: Reverse
Name: 78045620
Synonym: XCV0064
Alternate gene names: NA
Gene position: 77177-76728 (Counterclockwise)
Preceding gene: 78045623
Following gene: 78045619
Centisome position: 1.49
GC content: 63.11
Gene sequence:
>450_bases ATGGACAGGATCACCACCATCGCGCGATGCCTCGTGCTGGCAACGTCAGTGCTGTGTGGCGCGGCATACGTGCAGCCGGC GCATGCACAAGGCATGCGCTCGGCCACCGGCACGGCAACAAGCAAGTACATTGCGCCAACGCAACAGCCGTATAACTCGA TGGCGCACGACACCACGCCCTTCAACTGCGAGCAATACCGCACGCACCCGCATCCGGGCATGGTGCGTTACTGCCAAGGC GTCGAGAACATGATGCTGCGCAATGAAGCGCAACGTCAGGGGCGCCCTGCCCCATCGGACTCCGTCATCACATTGCCGGG TCTTGGCACTGCAGAAGCCAAGCAGCTGGGTTATGCATGCGTGGGCGGGCAAGCGATGAAGCGGCTGCGCAATGGATGGG AGCAGGTGGCGGCTCCTGCCGGTGGGTGGCAGCGGTGTTTGGGTGGGTAA
Upstream 100 bases:
>100_bases GCGCCATGTGATCGAGCACGCAAGCTCGCACCGTCAAGCGACCTGATCCACACGCGCATGCAGCGCGTGGGCTAGGATCG GTGCATACAGGGGGAACACC
Downstream 100 bases:
>100_bases GTAAACCTGACCCCGTTATTTTGGACAGAGGAAGAACGTTGAGCATAGACCACTCAAATTATCGAATAGTCCCTACGAGG GTTATTGGCAAAGGCGGATT
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MDRITTIARCLVLATSVLCGAAYVQPAHAQGMRSATGTATSKYIAPTQQPYNSMAHDTTPFNCEQYRTHPHPGMVRYCQG VENMMLRNEAQRQGRPAPSDSVITLPGLGTAEAKQLGYACVGGQAMKRLRNGWEQVAAPAGGWQRCLGG
Sequences:
>Translated_149_residues MDRITTIARCLVLATSVLCGAAYVQPAHAQGMRSATGTATSKYIAPTQQPYNSMAHDTTPFNCEQYRTHPHPGMVRYCQG VENMMLRNEAQRQGRPAPSDSVITLPGLGTAEAKQLGYACVGGQAMKRLRNGWEQVAAPAGGWQRCLGG >Mature_149_residues MDRITTIARCLVLATSVLCGAAYVQPAHAQGMRSATGTATSKYIAPTQQPYNSMAHDTTPFNCEQYRTHPHPGMVRYCQG VENMMLRNEAQRQGRPAPSDSVITLPGLGTAEAKQLGYACVGGQAMKRLRNGWEQVAAPAGGWQRCLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16039; Mature: 16039
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRITTIARCLVLATSVLCGAAYVQPAHAQGMRSATGTATSKYIAPTQQPYNSMAHDTTP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHCCCCCCCCCCCCCCHHHHHHCCCCC FNCEQYRTHPHPGMVRYCQGVENMMLRNEAQRQGRPAPSDSVITLPGLGTAEAKQLGYAC CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCHH VGGQAMKRLRNGWEQVAAPAGGWQRCLGG CCHHHHHHHHHHHHHHCCCCCHHHHHHCC >Mature Secondary Structure MDRITTIARCLVLATSVLCGAAYVQPAHAQGMRSATGTATSKYIAPTQQPYNSMAHDTTP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHCCCCCCCCCCCCCCHHHHHHCCCCC FNCEQYRTHPHPGMVRYCQGVENMMLRNEAQRQGRPAPSDSVITLPGLGTAEAKQLGYAC CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCHH VGGQAMKRLRNGWEQVAAPAGGWQRCLGG CCHHHHHHHHHHHHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA