| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045605
Identifier: 78045605
GI number: 78045605
Start: 57425
End: 58210
Strand: Reverse
Name: 78045605
Synonym: XCV0049
Alternate gene names: NA
Gene position: 58210-57425 (Counterclockwise)
Preceding gene: 78045606
Following gene: 78045599
Centisome position: 1.12
GC content: 64.38
Gene sequence:
>786_bases ATGTCGTCGTTTCTGGACACACGCATCAGCCGCCGTCGCCTGATGGCTGCCGCCGGCACCTCGCTGCTGGCCACCAGTCT CGCCACACCGACCATGACGCCACCGCCCTCGGATGTGGGCCGCAAGTTTCTGCGCTCGCGACGGCCGATGCCGTTTGCCG GCAATACCTTCGTGGGTCATCTGGAACAACAGGGCGATGGCTACGACAGCTTCGACCGCGTGCTGAACATCTACCGCCAA TTCCCCGAGCAGCGCTTTGCCCACAAGTTCGCCGTGCTGCCGCCGAGCAGCTACCACGTGACCTTGTTGGGCGGGGTCAA CGAGATCGATCGTGCGCGTGGGCCCTGGCCGAGCGATCTGCCGCGCGACCATGCCTTGGCGGATATCAACGCGGCCTATC TGGCGCGGTTGAAGGAGCGCGCCGCACCGCCGCTGGGCGCTTGCCGCTTCCTGGTCAACCCGACCGCAGCCAGGACCGGC AATAACGACAATCTGCTGATTCCGTTGAAGCCGGCCGACACGCAAACCGCGCAGCGCCTGGAAGCTGCGCGCCAGGCGCT GATGCAACTGACACGCTTGCAGCGCCCCGACTACACCAACTTCCAGTTTCATATTTCGCTGGCCTACCTGTGCGACACGC TGGATGCGGCAGAACAGACGGCGTATCGCTCCGCGGTGCGCGGCTGGCTCACACAGCTGGCAGCCGCGGGGCCGATCACG GTGCCACGCTTTCATTTTTGTACGTTCAACGACATGGACGCGTTTCGCACGGTGCAAGAGGTCTGA
Upstream 100 bases:
>100_bases GAATACCGCATCGGCCGCCACCAGGAATACGTGCAATCGGCCTGGAAAATGGCACCCACCGTGATGCTCGGCGTCAACGT CAAACTCTGAGGGTTTTCCC
Downstream 100 bases:
>100_bases GGTTGCGTGGAGTCGGCGGCGCAGCGATGTGCGCCGGCCACGTGGTTTCAGAACTCCCCGCCGCGCACAGAGCGCTTGGT TTTCTGCCTGGCGTGCTCGG
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSSFLDTRISRRRLMAAAGTSLLATSLATPTMTPPPSDVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYDSFDRVLNIYRQ FPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDLPRDHALADINAAYLARLKERAAPPLGACRFLVNPTAARTG NNDNLLIPLKPADTQTAQRLEAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRSAVRGWLTQLAAAGPIT VPRFHFCTFNDMDAFRTVQEV
Sequences:
>Translated_261_residues MSSFLDTRISRRRLMAAAGTSLLATSLATPTMTPPPSDVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYDSFDRVLNIYRQ FPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDLPRDHALADINAAYLARLKERAAPPLGACRFLVNPTAARTG NNDNLLIPLKPADTQTAQRLEAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRSAVRGWLTQLAAAGPIT VPRFHFCTFNDMDAFRTVQEV >Mature_260_residues SSFLDTRISRRRLMAAAGTSLLATSLATPTMTPPPSDVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYDSFDRVLNIYRQF PEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDLPRDHALADINAAYLARLKERAAPPLGACRFLVNPTAARTGN NDNLLIPLKPADTQTAQRLEAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRSAVRGWLTQLAAAGPITV PRFHFCTFNDMDAFRTVQEV
Specific function: Unknown
COG id: COG5255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29134; Mature: 29002
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFLDTRISRRRLMAAAGTSLLATSLATPTMTPPPSDVGRKFLRSRRPMPFAGNTFVGH CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH LEQQGDGYDSFDRVLNIYRQFPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHCCCCCCCCC PRDHALADINAAYLARLKERAAPPLGACRFLVNPTAARTGNNDNLLIPLKPADTQTAQRL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCEEEEECCCCHHHHHHH EAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRSAVRGWLTQLAAAGPIT HHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VPRFHFCTFNDMDAFRTVQEV CCCEEEEECCCHHHHHHHHCC >Mature Secondary Structure SSFLDTRISRRRLMAAAGTSLLATSLATPTMTPPPSDVGRKFLRSRRPMPFAGNTFVGH CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH LEQQGDGYDSFDRVLNIYRQFPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHCCCCCCCCC PRDHALADINAAYLARLKERAAPPLGACRFLVNPTAARTGNNDNLLIPLKPADTQTAQRL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCEEEEECCCCHHHHHHH EAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRSAVRGWLTQLAAAGPIT HHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VPRFHFCTFNDMDAFRTVQEV CCCEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA