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The map label for this gene is yedA [H]

Identifier: 162138529

GI number: 162138529

Start: 4690870

End: 4691766

Strand: Reverse

Name: yedA [H]

Synonym: XCV4094

Alternate gene names: 162138529

Gene position: 4691766-4690870 (Counterclockwise)

Preceding gene: 78049652

Following gene: 78049649

Centisome position: 90.6

GC content: 68.34

Gene sequence:

>897_bases
ATGTCTTCCTCTCACGATGCTGCCGCGCCTGCGCGCAGCGGGTTAGTCGTTCTCGCCTTGTTGCTGGTCTACGTGGTGTG
GGGCTCGACCTATCTGGCGATCCGTTTTGCGCTGGAAGGTGGCGCGCAGCCGCTGACGATGGTGTCCGGCGCACGTTTCA
TCGTCGCCGGTAGCGTGCTCTACAGCGTGCTGCGCTGGCGCGGTGTGGCGGCGCCAACGCGCGCGCAGTGGAAGAACGTG
GCGCTGATGGGTGCGGCGTTGCTGCTGCTCGGCAACGGCATGGTGGTGCTGGCCGAGCGCAGCGTGTCGTCCGGGCTGGC
CGCCACGGCGGTGGCGTCGGTGCCGTTGTGGATGGCCTTGTTCGGCGCATTGCGCGGGCAGCATGCCAGCGGCGGCGAAT
GGCTGGGCATCGTGATCGGCTTTGTGGGCGTGGTGTGGCTCAACGCCGGCAGCAGCCTGACCGCGACGCCGGTTGGCCTG
GTGTTGCTGCTGATCGCACCGATCGGCTGGGCATTCGGGTCGGTGTGGTCGCGCGGGCGCGATCTGCCTTCGCCGTTCAT
GACCGCTGCCGGGCAGATGGTGTGCGGCGGCGTGCTGCTGGTCAGTACCGGCCTGCTGATCGGCGAGCGCCCGCAGGTGT
GGCCGAGCCCGCAAGGACTGCTGGCGGTGGCGTACCTGTGCGTGTTCGGCTCGATCGTGGCGTTTACCGCCTACGTGTGG
CTGCTGCATCACGTGCGGCCTGCGCTCGCCGGTAGCTACGCCTACGTCAACCCGGTGATTGCGGTCAGCCTGGGTGCCTG
GTTGGGCCATGAGCGCTTCAGCGCGCAGGACATCGGTGCGATGGCGGTGATTCTGGCCGGCGTGCTGGTGGTCACCTTCG
CCAAGGCGCGGCGATGA

Upstream 100 bases:

>100_bases
ATGCGGTGTGAAGTGCACCATAGCGCGACCGAGGTGCGGCGTGGGCTTTGGCATGTGCTCTAGAATCGAAGGTTCCGCTG
CACTGCCTGGCACTGTTCCG

Downstream 100 bases:

>100_bases
GCGCGGTGTCGTCGCAGGAAGCACGCCGCGGGTTGTTGATCACCGCCTCCACCTTCGTGCTGTGGGGGCTGGTGCCGGTG
TACTGGCATCTGCTCAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVLYSVLRWRGVAAPTRAQWKNV
ALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMALFGALRGQHASGGEWLGIVIGFVGVVWLNAGSSLTATPVGL
VLLLIAPIGWAFGSVWSRGRDLPSPFMTAAGQMVCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR

Sequences:

>Translated_298_residues
MSSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVLYSVLRWRGVAAPTRAQWKNV
ALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMALFGALRGQHASGGEWLGIVIGFVGVVWLNAGSSLTATPVGL
VLLLIAPIGWAFGSVWSRGRDLPSPFMTAAGQMVCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR
>Mature_297_residues
SSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVLYSVLRWRGVAAPTRAQWKNVA
LMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMALFGALRGQHASGGEWLGIVIGFVGVVWLNAGSSLTATPVGLV
LLLIAPIGWAFGSVWSRGRDLPSPFMTAAGQMVCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVWL
LHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=278, Percent_Identity=45.3237410071942, Blast_Score=187, Evalue=9e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30988; Mature: 30857

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVL
CCCCCCCCCCHHCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHCCCHHHHHHHHH
YSVLRWRGVAAPTRAQWKNVALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHH
FGALRGQHASGGEWLGIVIGFVGVVWLNAGSSLTATPVGLVLLLIAPIGWAFGSVWSRGR
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DLPSPFMTAAGQMVCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVL
CCCCCCCCCHHCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHCCCHHHHHHHHH
YSVLRWRGVAAPTRAQWKNVALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHH
FGALRGQHASGGEWLGIVIGFVGVVWLNAGSSLTATPVGLVLLLIAPIGWAFGSVWSRGR
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DLPSPFMTAAGQMVCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]