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The map label for this gene is ypjA [H]

Identifier: 78045229

GI number: 78045229

Start: 243813

End: 244400

Strand: Direct

Name: ypjA [H]

Synonym: CHY_0278

Alternate gene names: 78045229

Gene position: 243813-244400 (Clockwise)

Preceding gene: 78042659

Following gene: 78044494

Centisome position: 10.15

GC content: 41.5

Gene sequence:

>588_bases
TTGAGTAAAATTACCGGGGTAATCGCTGACTACTGGCAAAACCCCCGCAAAAAGCTTTATGTTTTTTTGCTGCTGCTGGT
AAATTTATTTGGCAGTATCTGGGGGTACCTCTGGTACCGGGGACAACTTTTGCAAGAACCGCTTATTTTCTGGCCGTTAA
TCCCCGACAGTCCCGTGTCGACAACGCTGTTAACTTTGGCCTTTTTTTTGATGCTTTTTGGACGGGAAATTACTGCTCTT
ACCCTCTGGGCGGGGATGATGTGCTTTAAATACGGCTTCTGGGCCTTGGGAATCTTAATGCAGTTTTGGTATCTTTCCGG
ACGAATCGAGCCGGTTGAGGTAATGCTTTTTTTAAGTCACCTGGGTATGATTGTGGAAAGTATCATTTACGTGAAGGGTC
TACCGGTGACCAAAAAAGCCTATTTTTACAGTGTAATTTGGCTTATTCTGGAAGATGTTGTTGACTGGGGGTTTGGCTTA
CATCCCTATCTTTTCTTAGAGGAACAGTTTTCTTTTGCAGTTGTTTTAGCTGTAGTTTTAAGCGGTTTTATTTTGGTTTA
TTTTAAAAAGTTGGTTCATATAAATTAA

Upstream 100 bases:

>100_bases
ATTGGGGATGGAGCAATGATTGGAGCGGGAGCGGTGGTGACGAAAGATATTCCTCCCGGGGTGTTAGCGGTGGGAGTGCC
CGCCCGGGTGGTGAAAAAAA

Downstream 100 bases:

>100_bases
CAAGAAGGATAATCTTAAGCTTTGGGCGAATTATTTACATAAAGGTTTTCTTCTTAGGAGTGAATGACGAATGCCGATGG
ATTTTGGACTGAATTTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSKITGVIADYWQNPRKKLYVFLLLLVNLFGSIWGYLWYRGQLLQEPLIFWPLIPDSPVSTTLLTLAFFLMLFGREITAL
TLWAGMMCFKYGFWALGILMQFWYLSGRIEPVEVMLFLSHLGMIVESIIYVKGLPVTKKAYFYSVIWLILEDVVDWGFGL
HPYLFLEEQFSFAVVLAVVLSGFILVYFKKLVHIN

Sequences:

>Translated_195_residues
MSKITGVIADYWQNPRKKLYVFLLLLVNLFGSIWGYLWYRGQLLQEPLIFWPLIPDSPVSTTLLTLAFFLMLFGREITAL
TLWAGMMCFKYGFWALGILMQFWYLSGRIEPVEVMLFLSHLGMIVESIIYVKGLPVTKKAYFYSVIWLILEDVVDWGFGL
HPYLFLEEQFSFAVVLAVVLSGFILVYFKKLVHIN
>Mature_194_residues
SKITGVIADYWQNPRKKLYVFLLLLVNLFGSIWGYLWYRGQLLQEPLIFWPLIPDSPVSTTLLTLAFFLMLFGREITALT
LWAGMMCFKYGFWALGILMQFWYLSGRIEPVEVMLFLSHLGMIVESIIYVKGLPVTKKAYFYSVIWLILEDVVDWGFGLH
PYLFLEEQFSFAVVLAVVLSGFILVYFKKLVHIN

Specific function: Unknown

COG id: COG4347

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009845 [H]

Pfam domain/function: PF07187 DUF1405 [H]

EC number: NA

Molecular weight: Translated: 22731; Mature: 22599

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKITGVIADYWQNPRKKLYVFLLLLVNLFGSIWGYLWYRGQLLQEPLIFWPLIPDSPVS
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCHH
TTLLTLAFFLMLFGREITALTLWAGMMCFKYGFWALGILMQFWYLSGRIEPVEVMLFLSH
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LGMIVESIIYVKGLPVTKKAYFYSVIWLILEDVVDWGFGLHPYLFLEEQFSFAVVLAVVL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SGFILVYFKKLVHIN
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKITGVIADYWQNPRKKLYVFLLLLVNLFGSIWGYLWYRGQLLQEPLIFWPLIPDSPVS
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCHH
TTLLTLAFFLMLFGREITALTLWAGMMCFKYGFWALGILMQFWYLSGRIEPVEVMLFLSH
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LGMIVESIIYVKGLPVTKKAYFYSVIWLILEDVVDWGFGLHPYLFLEEQFSFAVVLAVVL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SGFILVYFKKLVHIN
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]