Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78045131

Identifier: 78045131

GI number: 78045131

Start: 2318859

End: 2319536

Strand: Direct

Name: 78045131

Synonym: CHY_2607

Alternate gene names: NA

Gene position: 2318859-2319536 (Clockwise)

Preceding gene: 78044402

Following gene: 78045041

Centisome position: 96.56

GC content: 47.2

Gene sequence:

>678_bases
ATGCGCCAGGTTGAAGTAAACTGCTGTCCGGTGGTTATGGACGCGGTTACCGAGTCAGGAATTAAGTGCTTTCACAACAC
CCATATCCTGTGTAAAGACACCAACGGCAATTGCATTCCAATTGACGCATGTATTTTAAAAGCTATTGTTTATGATTTAA
ACATTATTTCCGTTCAACAGGTCAATGGCTGCATGAACATTAAAGGTACCTATAGGGTAAGGGTTCTTTACGAATTCGAT
AACCAGACCCAGGTAGGTACTGCCGACGAGCAATTTGATTTTGATGTAAACATACCATTAGCTAAAACCGACTGCATCGT
TGCCAAATGTGACTGCTGTGAAGAAGAATGTGCAACCGCTACTAAACTCCATGTAATTTTTGCCACCGTGGAAATGGATA
CCACCGGTTCCTGTCAGGGACAATGCACGGGCTCCCCTGTAGTGCGCATCAGAGTAATTGTGGAAAAAGAATTTATGGCG
TTTAAGCACTGCAAAGCCGTGGTATGCTTACCTCTCTGCCCGCCCGAGTTCTGCGCCCCCGGCGAAGGACCTCCGGCAGG
AGAATGCCCCGATTATGTGGAAACTACCGAATGCCCATCCTGGTGTCAGGATAACCCCGATTCTCCGTATAATGAATGCA
CATCCTGTCCGCCACCGCAAGTTACCGGAACCCCATAA

Upstream 100 bases:

>100_bases
AAAAATTTTTTAAAGGTTTCTTCACCGCACCCTTTTCAAAAAAACGTCATATTATACAATAGCACCGAACAAATAAAAGC
TTTGGAAGGGAGGAAATTAC

Downstream 100 bases:

>100_bases
AAAATCCCCCCTCAATGCTGGGGGGATTTTTCTTTTAAAACACAATTTTAAATTTCTGAAAAAACCAGTCGTCAGCGTAT
TTTCTGGCTTTAAATAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQVNGCMNIKGTYRVRVLYEFD
NQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATATKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMA
FKHCKAVVCLPLCPPEFCAPGEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP

Sequences:

>Translated_225_residues
MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQVNGCMNIKGTYRVRVLYEFD
NQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATATKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMA
FKHCKAVVCLPLCPPEFCAPGEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP
>Mature_225_residues
MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQVNGCMNIKGTYRVRVLYEFD
NQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATATKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMA
FKHCKAVVCLPLCPPEFCAPGEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24606; Mature: 24606

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
12.4 %Cys+Met (Translated Protein)
10.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
12.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQ
CCEEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCEEEHHHHHHHHHHHHCCEEEEEE
VNGCMNIKGTYRVRVLYEFDNQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATA
CCCEEECCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHCCC
TKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMAFKHCKAVVCLPLCPPEFCAP
EEEEEEEEEEEECCCCCCCCEECCCCEEEEEEEEEHHHHHHHHCCEEEEEECCCHHHCCC
GEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQ
CCEEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCEEEHHHHHHHHHHHHCCEEEEEE
VNGCMNIKGTYRVRVLYEFDNQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATA
CCCEEECCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHCCC
TKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMAFKHCKAVVCLPLCPPEFCAP
EEEEEEEEEEEECCCCCCCCEECCCCEEEEEEEEEHHHHHHHHCCEEEEEECCCHHHCCC
GEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA