| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78045131
Identifier: 78045131
GI number: 78045131
Start: 2318859
End: 2319536
Strand: Direct
Name: 78045131
Synonym: CHY_2607
Alternate gene names: NA
Gene position: 2318859-2319536 (Clockwise)
Preceding gene: 78044402
Following gene: 78045041
Centisome position: 96.56
GC content: 47.2
Gene sequence:
>678_bases ATGCGCCAGGTTGAAGTAAACTGCTGTCCGGTGGTTATGGACGCGGTTACCGAGTCAGGAATTAAGTGCTTTCACAACAC CCATATCCTGTGTAAAGACACCAACGGCAATTGCATTCCAATTGACGCATGTATTTTAAAAGCTATTGTTTATGATTTAA ACATTATTTCCGTTCAACAGGTCAATGGCTGCATGAACATTAAAGGTACCTATAGGGTAAGGGTTCTTTACGAATTCGAT AACCAGACCCAGGTAGGTACTGCCGACGAGCAATTTGATTTTGATGTAAACATACCATTAGCTAAAACCGACTGCATCGT TGCCAAATGTGACTGCTGTGAAGAAGAATGTGCAACCGCTACTAAACTCCATGTAATTTTTGCCACCGTGGAAATGGATA CCACCGGTTCCTGTCAGGGACAATGCACGGGCTCCCCTGTAGTGCGCATCAGAGTAATTGTGGAAAAAGAATTTATGGCG TTTAAGCACTGCAAAGCCGTGGTATGCTTACCTCTCTGCCCGCCCGAGTTCTGCGCCCCCGGCGAAGGACCTCCGGCAGG AGAATGCCCCGATTATGTGGAAACTACCGAATGCCCATCCTGGTGTCAGGATAACCCCGATTCTCCGTATAATGAATGCA CATCCTGTCCGCCACCGCAAGTTACCGGAACCCCATAA
Upstream 100 bases:
>100_bases AAAAATTTTTTAAAGGTTTCTTCACCGCACCCTTTTCAAAAAAACGTCATATTATACAATAGCACCGAACAAATAAAAGC TTTGGAAGGGAGGAAATTAC
Downstream 100 bases:
>100_bases AAAATCCCCCCTCAATGCTGGGGGGATTTTTCTTTTAAAACACAATTTTAAATTTCTGAAAAAACCAGTCGTCAGCGTAT TTTCTGGCTTTAAATAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQVNGCMNIKGTYRVRVLYEFD NQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATATKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMA FKHCKAVVCLPLCPPEFCAPGEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP
Sequences:
>Translated_225_residues MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQVNGCMNIKGTYRVRVLYEFD NQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATATKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMA FKHCKAVVCLPLCPPEFCAPGEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP >Mature_225_residues MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQVNGCMNIKGTYRVRVLYEFD NQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATATKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMA FKHCKAVVCLPLCPPEFCAPGEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24606; Mature: 24606
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 12.4 %Cys+Met (Translated Protein) 10.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 12.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQ CCEEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCEEEHHHHHHHHHHHHCCEEEEEE VNGCMNIKGTYRVRVLYEFDNQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATA CCCEEECCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHCCC TKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMAFKHCKAVVCLPLCPPEFCAP EEEEEEEEEEEECCCCCCCCEECCCCEEEEEEEEEHHHHHHHHCCEEEEEECCCHHHCCC GEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP CCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MRQVEVNCCPVVMDAVTESGIKCFHNTHILCKDTNGNCIPIDACILKAIVYDLNIISVQQ CCEEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCEEEHHHHHHHHHHHHCCEEEEEE VNGCMNIKGTYRVRVLYEFDNQTQVGTADEQFDFDVNIPLAKTDCIVAKCDCCEEECATA CCCEEECCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHCCC TKLHVIFATVEMDTTGSCQGQCTGSPVVRIRVIVEKEFMAFKHCKAVVCLPLCPPEFCAP EEEEEEEEEEEECCCCCCCCEECCCCEEEEEEEEEHHHHHHHHCCEEEEEECCCHHHCCC GEGPPAGECPDYVETTECPSWCQDNPDSPYNECTSCPPPQVTGTP CCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA