| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78045123
Identifier: 78045123
GI number: 78045123
Start: 747332
End: 747853
Strand: Direct
Name: 78045123
Synonym: CHY_0839
Alternate gene names: NA
Gene position: 747332-747853 (Clockwise)
Preceding gene: 78045096
Following gene: 78042893
Centisome position: 31.12
GC content: 47.51
Gene sequence:
>522_bases ATGGCAACAAAGGGATACAAACGGGAACACGGTCTTACCATCGAACAACTTAATGCTGTTGAACTTTTAGTTATGGGCAA GACCGATAAAGAAGTGGCCGAAGCTGTGGGAGTGAACCGGGTAACGGTTACAAAATGGCGGTTGTATGACCCTTATTTTC AAGCTGAGTTAAACAGGAGGAGGAAAGAAATATGGGGCGTTGCAGTAGACAGGTTTAGAAGCCTTCTATTGAAGGCCCTG AATACGGTTGAGAAGGCCCTTAACGAGGGAGATACAAGGACGGCGGTTGAAATTCTCCGGATGGCTGGACTGGACATGAC AAAAGGGGGTGGCACTCTGGGGACATACCTTGTAGGTGAGACGGAAGCGGAAAAGATACTTGAGGAATTAGCAGAAGCGA AGAAGCGAGAAGAAACATTCAAGGCTTTTTCTGTTGCCGATTGGGAGAAGAAAAGCGTCCTTGACGAACTCGAAGAACTG GCAAGAAGATTGGAGAGGTTGCAGACCAGAACCGGAACATAG
Upstream 100 bases:
>100_bases TACTCTTTCACGAGGGTGGTTGAAATGCTACGCACATTGTGAACCTCGAGGCCATACCTGTGACCGCAAACGGTCACAAA CAATAAGGGAGGGGTGAAAT
Downstream 100 bases:
>100_bases CGAAAACAATTGCTTGGATAACGCAAAATAACGCAACCCCCCCTGAAAACGGACATTTTCGGACATCATTAAAAGCCCAG TCGCAAGAGAAAGACGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MATKGYKREHGLTIEQLNAVELLVMGKTDKEVAEAVGVNRVTVTKWRLYDPYFQAELNRRRKEIWGVAVDRFRSLLLKAL NTVEKALNEGDTRTAVEILRMAGLDMTKGGGTLGTYLVGETEAEKILEELAEAKKREETFKAFSVADWEKKSVLDELEEL ARRLERLQTRTGT
Sequences:
>Translated_173_residues MATKGYKREHGLTIEQLNAVELLVMGKTDKEVAEAVGVNRVTVTKWRLYDPYFQAELNRRRKEIWGVAVDRFRSLLLKAL NTVEKALNEGDTRTAVEILRMAGLDMTKGGGTLGTYLVGETEAEKILEELAEAKKREETFKAFSVADWEKKSVLDELEEL ARRLERLQTRTGT >Mature_172_residues ATKGYKREHGLTIEQLNAVELLVMGKTDKEVAEAVGVNRVTVTKWRLYDPYFQAELNRRRKEIWGVAVDRFRSLLLKALN TVEKALNEGDTRTAVEILRMAGLDMTKGGGTLGTYLVGETEAEKILEELAEAKKREETFKAFSVADWEKKSVLDELEELA RRLERLQTRTGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19661; Mature: 19530
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKGYKREHGLTIEQLNAVELLVMGKTDKEVAEAVGVNRVTVTKWRLYDPYFQAELNRR CCCCCCCHHHCCCHHHHCHHHEEEECCCHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHH RKEIWGVAVDRFRSLLLKALNTVEKALNEGDTRTAVEILRMAGLDMTKGGGTLGTYLVGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHEECC TEAEKILEELAEAKKREETFKAFSVADWEKKSVLDELEELARRLERLQTRTGT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATKGYKREHGLTIEQLNAVELLVMGKTDKEVAEAVGVNRVTVTKWRLYDPYFQAELNRR CCCCCCHHHCCCHHHHCHHHEEEECCCHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHH RKEIWGVAVDRFRSLLLKALNTVEKALNEGDTRTAVEILRMAGLDMTKGGGTLGTYLVGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHEECC TEAEKILEELAEAKKREETFKAFSVADWEKKSVLDELEELARRLERLQTRTGT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA