| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is cysA [H]
Identifier: 78044958
GI number: 78044958
Start: 441246
End: 441917
Strand: Direct
Name: cysA [H]
Synonym: CHY_0510
Alternate gene names: 78044958
Gene position: 441246-441917 (Clockwise)
Preceding gene: 78043181
Following gene: 78044348
Centisome position: 18.37
GC content: 40.18
Gene sequence:
>672_bases GTGATTCAGTTTAAAGATGTTAAATTTAGTAAGGATCCCCGCTTTAATCCTCTCACTTTTTCCGTAGAACAGCCGGGGAT TGTAGGAATTTGCGGACCAGCAAAGACCGGTAAGACTGCCTGCCTTTTAGCAATGATTGGTGGCGTGAGACCGGTTGCAG GATCAATAACGGTTTTAGGTTTAAATCCGGTGAAAAAACAGCGGGAAATAAGACAAAAGGTGGGGCTTTCTTTTGTAGAA GGGGTTTATGAGCCGTACTTTTCCCTCTCAGTTTTTGATAACTTTAAATTTCAAGGAGCTTTGTTAGGGAAAAAAGTCAC ACCCGTCGAGGTGGATAGACTTTTGGAGAAGATTGAAGCAAATTTTACAAAAGAAAGTATAATTGCCGATTTAAATCCTT TACAGAGAATTAAAGTTGGTTTAGCCCTGGCTTTACTTGGGGAACCACCGGTGGTCTTAATTGATGAACCCTTCAGGAAC CTCACCTGCCTTGAACGAAAACATATTGAAAAAATTCTTGTAAATTTAAAGCAAGAAGGGAAGTTAGTTATTTATACCAC TTTAAAAGAAGAAGAGCTTGGTATTGCCGATACAGTAGTGGACGTTGTGCAAGGAGGTGTAAGCAATGAATTTCTTGAAA ATTGCGCGGGTCGAGCTAAAACAGCTTCTTAG
Upstream 100 bases:
>100_bases AAAAGAAAATCAAAATTTGACCGGTTGACCAGCCGGTCAAATTTTTTTATATTATTATTTGACTGACTGGTCAGTATAAA TCTTAAAAGGGGGTGTGCAG
Downstream 100 bases:
>100_bases TACCCGTCAAGCCCGAGTAGCGTTAATTGTGATAATTTTAATGCCGTTACTATACAGCTTTGTTTATTTGTCAGCGTTTT GGGACCCTTATGGCAATCTA
Product: putative anion ABC transporter ATP-binding protein
Products: NA
Alternate protein names: Sulfate-transporting ATPase [H]
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MIQFKDVKFSKDPRFNPLTFSVEQPGIVGICGPAKTGKTACLLAMIGGVRPVAGSITVLGLNPVKKQREIRQKVGLSFVE GVYEPYFSLSVFDNFKFQGALLGKKVTPVEVDRLLEKIEANFTKESIIADLNPLQRIKVGLALALLGEPPVVLIDEPFRN LTCLERKHIEKILVNLKQEGKLVIYTTLKEEELGIADTVVDVVQGGVSNEFLENCAGRAKTAS
Sequences:
>Translated_223_residues MIQFKDVKFSKDPRFNPLTFSVEQPGIVGICGPAKTGKTACLLAMIGGVRPVAGSITVLGLNPVKKQREIRQKVGLSFVE GVYEPYFSLSVFDNFKFQGALLGKKVTPVEVDRLLEKIEANFTKESIIADLNPLQRIKVGLALALLGEPPVVLIDEPFRN LTCLERKHIEKILVNLKQEGKLVIYTTLKEEELGIADTVVDVVQGGVSNEFLENCAGRAKTAS >Mature_223_residues MIQFKDVKFSKDPRFNPLTFSVEQPGIVGICGPAKTGKTACLLAMIGGVRPVAGSITVLGLNPVKKQREIRQKVGLSFVE GVYEPYFSLSVFDNFKFQGALLGKKVTPVEVDRLLEKIEANFTKESIIADLNPLQRIKVGLALALLGEPPVVLIDEPFRN LTCLERKHIEKILVNLKQEGKLVIYTTLKEEELGIADTVVDVVQGGVSNEFLENCAGRAKTAS
Specific function: Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system [H]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1788761, Length=218, Percent_Identity=29.3577981651376, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87081782, Length=177, Percent_Identity=27.1186440677966, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787712, Length=175, Percent_Identity=29.1428571428571, Blast_Score=61, Evalue=5e-11, Organism=Escherichia coli, GI1786563, Length=198, Percent_Identity=29.7979797979798, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014769 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR005666 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.25 [H]
Molecular weight: Translated: 24440; Mature: 24440
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFKDVKFSKDPRFNPLTFSVEQPGIVGICGPAKTGKTACLLAMIGGVRPVAGSITVLG CCEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEE LNPVKKQREIRQKVGLSFVEGVYEPYFSLSVFDNFKFQGALLGKKVTPVEVDRLLEKIEA CCCHHHHHHHHHHHCHHHHHHHHHHHEEEEEECCCEECEEECCCCCCHHHHHHHHHHHHC NFTKESIIADLNPLQRIKVGLALALLGEPPVVLIDEPFRNLTCLERKHIEKILVNLKQEG CCCHHHHHHCCCHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC KLVIYTTLKEEELGIADTVVDVVQGGVSNEFLENCAGRAKTAS CEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MIQFKDVKFSKDPRFNPLTFSVEQPGIVGICGPAKTGKTACLLAMIGGVRPVAGSITVLG CCEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEE LNPVKKQREIRQKVGLSFVEGVYEPYFSLSVFDNFKFQGALLGKKVTPVEVDRLLEKIEA CCCHHHHHHHHHHHCHHHHHHHHHHHEEEEEECCCEECEEECCCCCCHHHHHHHHHHHHC NFTKESIIADLNPLQRIKVGLALALLGEPPVVLIDEPFRNLTCLERKHIEKILVNLKQEG CCCHHHHHHCCCHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC KLVIYTTLKEEELGIADTVVDVVQGGVSNEFLENCAGRAKTAS CEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]