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The map label for this gene is yvrC [H]

Identifier: 78044935

GI number: 78044935

Start: 339528

End: 340433

Strand: Direct

Name: yvrC [H]

Synonym: CHY_0397

Alternate gene names: 78044935

Gene position: 339528-340433 (Clockwise)

Preceding gene: 78042807

Following gene: 78043778

Centisome position: 14.14

GC content: 37.64

Gene sequence:

>906_bases
ATGGTGAAAAAAAGATGGGTGGTATTTTTAGCTGTTGCCGTCATTCTGTTGGTGGCGGTAGCTCCATTACTGGCAGGGCA
AAGTAAGGGAATAACGGTAAAAGATTCTAAAGGAAACGTTTTTACCTTTAAAAGTTATCCCAAAAGAATTGTATCTCTTG
CCCCAAGTAATACTGAAATCTTATTTGCTCTGGGATTAGATAAGTATATTGTAGGTGTTACTAACTTTTGCGATTACCCA
GCAGCGGCCAAAAAAAAGGCCAAGGTGGGCGATGCATTTAATGTTAATGTAGAAAAAATTGTAAGCTTAAAACCTGACCT
GGTGGTGGCCCAGGATAGTATTTCACCGGATGCTATTAAAAAACTGCAAAACTTAAAAATTAAGGTGTTTGTTTTAAAAG
AACCGAAAAACTTTAACGATATTTTAAATAACATAAAGCTGGTTGGTAAAGCTACCGGTAAATACTCTAAAGCTGTAAGC
ATTACTAATAATATGCAGGCAAGATTAAATAAACTTACAGCAAAGTTAAAAAAATACAACAAAAAACCGTCGGTCTTGGT
AGAGGTTGATTATGCGTACGGTTTATATGTTGCCGGACCAAACACCTTCATTAATGATCTCCTCGTAAAAGCAGGCGGTA
AAAACGTCATAACCAGTGGTAGCTGGGTAAACCTTTCCGATGAAAAGCTCTTAACTTTAAATCCTGATTATATTTTACTT
GCTGATACCGCTTATTTAAAACCGGACCAACATCCATACAAACGTGAACTCTGGCAGTCACTGCGCGCAGTTAAAGAAAA
GAAAGTTATTGACAGCATTGATCCTAATTTAATTGTGCGACCGGGTCCCCGGACCATTGACGGGATTGAAAAATTAGCTA
AAGCCCTTCATCCTGGTTTAAAATAG

Upstream 100 bases:

>100_bases
TCGCGGCGAAGGGAGGGATTGTAAGGCTTTTGGTTATAATCCGCTTACCGAACCGGGAAGCGGATTTTTTACTAAATTTA
ACAAATAAGGGGGCGAAAAA

Downstream 100 bases:

>100_bases
GTGAGAAAATGAAATCGTGGTGGGTAAAGTTATTTTTAGGAGGAGTTATTTTACTCCTCCTCCTTATTTTTGTTATATTG
TTGGCGGCAAACTTGGGAGC

Product: iron compound ABC transporter iron-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MVKKRWVVFLAVAVILLVAVAPLLAGQSKGITVKDSKGNVFTFKSYPKRIVSLAPSNTEILFALGLDKYIVGVTNFCDYP
AAAKKKAKVGDAFNVNVEKIVSLKPDLVVAQDSISPDAIKKLQNLKIKVFVLKEPKNFNDILNNIKLVGKATGKYSKAVS
ITNNMQARLNKLTAKLKKYNKKPSVLVEVDYAYGLYVAGPNTFINDLLVKAGGKNVITSGSWVNLSDEKLLTLNPDYILL
ADTAYLKPDQHPYKRELWQSLRAVKEKKVIDSIDPNLIVRPGPRTIDGIEKLAKALHPGLK

Sequences:

>Translated_301_residues
MVKKRWVVFLAVAVILLVAVAPLLAGQSKGITVKDSKGNVFTFKSYPKRIVSLAPSNTEILFALGLDKYIVGVTNFCDYP
AAAKKKAKVGDAFNVNVEKIVSLKPDLVVAQDSISPDAIKKLQNLKIKVFVLKEPKNFNDILNNIKLVGKATGKYSKAVS
ITNNMQARLNKLTAKLKKYNKKPSVLVEVDYAYGLYVAGPNTFINDLLVKAGGKNVITSGSWVNLSDEKLLTLNPDYILL
ADTAYLKPDQHPYKRELWQSLRAVKEKKVIDSIDPNLIVRPGPRTIDGIEKLAKALHPGLK
>Mature_301_residues
MVKKRWVVFLAVAVILLVAVAPLLAGQSKGITVKDSKGNVFTFKSYPKRIVSLAPSNTEILFALGLDKYIVGVTNFCDYP
AAAKKKAKVGDAFNVNVEKIVSLKPDLVVAQDSISPDAIKKLQNLKIKVFVLKEPKNFNDILNNIKLVGKATGKYSKAVS
ITNNMQARLNKLTAKLKKYNKKPSVLVEVDYAYGLYVAGPNTFINDLLVKAGGKNVITSGSWVNLSDEKLLTLNPDYILL
ADTAYLKPDQHPYKRELWQSLRAVKEKKVIDSIDPNLIVRPGPRTIDGIEKLAKALHPGLK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=253, Percent_Identity=27.2727272727273, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33155; Mature: 33155

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKRWVVFLAVAVILLVAVAPLLAGQSKGITVKDSKGNVFTFKSYPKRIVSLAPSNTEI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHHEECCCCCEE
LFALGLDKYIVGVTNFCDYPAAAKKKAKVGDAFNVNVEKIVSLKPDLVVAQDSISPDAIK
EEEECCCHHHHHHHHHCCCCCHHHHHHCCCCEECCCHHHHEECCCCEEEEECCCCHHHHH
KLQNLKIKVFVLKEPKNFNDILNNIKLVGKATGKYSKAVSITNNMQARLNKLTAKLKKYN
HHHCCEEEEEEEECCCCHHHHHHHHEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
KKPSVLVEVDYAYGLYVAGPNTFINDLLVKAGGKNVITSGSWVNLSDEKLLTLNPDYILL
CCCCEEEEEECEEEEEEECCHHHHHHHHHHCCCCEEEECCCEEEECCCEEEEECCCEEEE
ADTAYLKPDQHPYKRELWQSLRAVKEKKVIDSIDPNLIVRPGPRTIDGIEKLAKALHPGL
ECCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCC
K
C
>Mature Secondary Structure
MVKKRWVVFLAVAVILLVAVAPLLAGQSKGITVKDSKGNVFTFKSYPKRIVSLAPSNTEI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHHEECCCCCEE
LFALGLDKYIVGVTNFCDYPAAAKKKAKVGDAFNVNVEKIVSLKPDLVVAQDSISPDAIK
EEEECCCHHHHHHHHHCCCCCHHHHHHCCCCEECCCHHHHEECCCCEEEEECCCCHHHHH
KLQNLKIKVFVLKEPKNFNDILNNIKLVGKATGKYSKAVSITNNMQARLNKLTAKLKKYN
HHHCCEEEEEEEECCCCHHHHHHHHEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
KKPSVLVEVDYAYGLYVAGPNTFINDLLVKAGGKNVITSGSWVNLSDEKLLTLNPDYILL
CCCCEEEEEECEEEEEEECCHHHHHHHHHHCCCCEEEECCCEEEECCCEEEEECCCEEEE
ADTAYLKPDQHPYKRELWQSLRAVKEKKVIDSIDPNLIVRPGPRTIDGIEKLAKALHPGL
ECCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]