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The map label for this gene is 78044920

Identifier: 78044920

GI number: 78044920

Start: 70160

End: 70588

Strand: Direct

Name: 78044920

Synonym: CHY_0080

Alternate gene names: NA

Gene position: 70160-70588 (Clockwise)

Preceding gene: 78042827

Following gene: 78044342

Centisome position: 2.92

GC content: 35.43

Gene sequence:

>429_bases
ATGATACCTTTTCGGGATGAAATAGAAAAAGCGGTGAAAAAAATAGTTTTATTGTGTTCTCCTGAAGAGGTCTACCTTTT
TGGTTCCTGTGCTCGAGGAGTAGCGACTTTAAGAAGTGATATTGATTTATGCGTAATAGTGAATACAAATGATAAAAGGA
AACTCTTGCAAGAAATTTATTTTAATATGGACGTGGAGCGAGAGGTGGATATTGTAATTTACACTCCGGAGGAATGGTTA
AGATTTAAAGACAATCCTGCTACATTACCCTATATAATTGCCCATAAGGGGGTTAAAATTTATGGTAGACACCAAGAATT
ATCAGGAATGGTTTTAAAAAGGCAGAAAGTGATTTTAAAGGAGCAAGGATTTTATTTGAACATGATGCTGATTTTGGGCT
TGTATGTTTTCACTGTCAGCAAGCTGTAG

Upstream 100 bases:

>100_bases
TTAGAAATGCCGAGGAGTTTATGGGCAGGGGTTAAAAGTCTGGATTTAAGTATCTTTTCCTGGCAAATTAAGGTATAATA
AAGAAAAACGAGGTGTTACG

Downstream 100 bases:

>100_bases
AAAAATACCTAAAGGGGTTTTTAATTTATAAAACTGGAATATTGTATGAAGGTCATAATCTCGTAAAGCTTTGCCAAAAA
GCAGCGAACTTATTATGTTG

Product: nucleotidyltransferase domain-containing protein

Products: NA

Alternate protein names: DNA Polymerase Beta Subunit; Nucleotidyltransferase Domain-Containing Protein; HEPN Domain Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIPFRDEIEKAVKKIVLLCSPEEVYLFGSCARGVATLRSDIDLCVIVNTNDKRKLLQEIYFNMDVEREVDIVIYTPEEWL
RFKDNPATLPYIIAHKGVKIYGRHQELSGMVLKRQKVILKEQGFYLNMMLILGLYVFTVSKL

Sequences:

>Translated_142_residues
MIPFRDEIEKAVKKIVLLCSPEEVYLFGSCARGVATLRSDIDLCVIVNTNDKRKLLQEIYFNMDVEREVDIVIYTPEEWL
RFKDNPATLPYIIAHKGVKIYGRHQELSGMVLKRQKVILKEQGFYLNMMLILGLYVFTVSKL
>Mature_142_residues
MIPFRDEIEKAVKKIVLLCSPEEVYLFGSCARGVATLRSDIDLCVIVNTNDKRKLLQEIYFNMDVEREVDIVIYTPEEWL
RFKDNPATLPYIIAHKGVKIYGRHQELSGMVLKRQKVILKEQGFYLNMMLILGLYVFTVSKL

Specific function: Unknown

COG id: COG1708

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16530; Mature: 16530

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFRDEIEKAVKKIVLLCSPEEVYLFGSCARGVATLRSDIDLCVIVNTNDKRKLLQEIY
CCCCHHHHHHHHHHEEEEECCCEEEEEECHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
FNMDVEREVDIVIYTPEEWLRFKDNPATLPYIIAHKGVKIYGRHQELSGMVLKRQKVILK
HCCCCCCCEEEEEECCHHHEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH
EQGFYLNMMLILGLYVFTVSKL
CCCCEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPFRDEIEKAVKKIVLLCSPEEVYLFGSCARGVATLRSDIDLCVIVNTNDKRKLLQEIY
CCCCHHHHHHHHHHEEEEECCCEEEEEECHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
FNMDVEREVDIVIYTPEEWLRFKDNPATLPYIIAHKGVKIYGRHQELSGMVLKRQKVILK
HCCCCCCCEEEEEECCHHHEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH
EQGFYLNMMLILGLYVFTVSKL
CCCCEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA