| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044812
Identifier: 78044812
GI number: 78044812
Start: 326302
End: 327990
Strand: Direct
Name: 78044812
Synonym: CHY_0382
Alternate gene names: NA
Gene position: 326302-327990 (Clockwise)
Preceding gene: 78043896
Following gene: 78042736
Centisome position: 13.59
GC content: 53.4
Gene sequence:
>1689_bases ATGCCGAAGAAGCAGGAGAAAGATGAATTTAGCTTTACAGTGTGCGGGGAGTTCTTCCCGGAAGTTTACCCGTCCTATCG GTCTTCTAAATGGAGCAGGGGCGGGGAAGACCCTCTTGTCACAGAGATGCGGCTTTTCTGCGCCTGTATGCGGTGGGCCT TTAACCGGCTTCTGGAAGGCACTTCCCGCGACGAGATTAAAAAACTCGGTCAGGAACTTTTTGGGCTAAACTCCCGGTAT GCGGACGACGCCAGGCTTAAGGCACAAGGTGTGCTGGACAGCCAAAAAAAGCTTCTGGAGCTGGAGATTGAGGAAACGGA AAAGAAATTGGGCCGGGCAAGGAAAAAGCTCGGCCCGGTTATGAGGAAGCTGGCAAAGGCAGAGGAAAAAGGAGCTACAC CGGAAGTTATTGAAAAGCTCCGTTTAGCGGTCAAGGGACGGAACAACCGGGTAGCGTCTTTAGAGAAGAAGCTGGCTGAA CTGGAAGTATACCGGGAGAACGGGACTGTACCCAGGGTAGTATTTGGCGGGAGAAAACTTTGGAAAAGAGTCAGCAGGGG CCGGGCCACACGGGAGGAATGGCAGGCCACACGCAAAAACCGTCTCTATTCCCGGGGCGACGAGACCAAGGGCAGCAACC CGAACATAAAGGTAACTTACCGGGATGGGGAATTCCACCTGGCGGTGACTGTTTCCCACCTCTCGGAAAAGGTGGGCGAA GACGTCCTGGGCCGCCCGAAGATGAACCGCGCTCCAAGAGTGGAGGGCAGGTTGTGGTTGCCGGAGAAACACCGGGAACT GGTGCGGATATGGCTGACCATGAGGCTGCCCTACACAGTAGAACTTATACGCACCCTGGAGGGCCGCTATATAGTGCATC TGACGTTTAATTTTGGCAGGGTACAGGAGCCCGACTTTGCTCAGGGTTGTTTAGCCCTGGACACCAACCCTGATGGAGTG GCCTTGTGCAATGTAAACGCTTCAGGCCAGCCGGAACCCTGGCCGGAAGGTTTTAGCATCCTTTATCCGGGCAACCCGGG CAAATATGAAAGAGAATTTCAGGTCATCACTTACCCGAACGGTTTTCTTTGCATCAAGGTGCCCGATCTAACTTATGCTT CCGGCTTCCGGCGGGATTACCTGATAGGCGTTTTAGCTAAATTGGTGGTAGACATTGCCCTCTTTTTGGGCAAGCCTATC ACCCTGGAGGGTTTAGATTTTGGTAAAGACAGGCTGGACACCAGCAAGAAGTTTAACCGCATGGCTTCCAACTTTCCCTT TGCCAAGATGGTGGAGGCGATGTGCCGGAGGGCGGTCAAAGAGGGAGTATCTTTTAAGGTAGTAGCTGCCCGGCACACGT CCACCATAGGTTACTGGAAGTACATGAAGCGTTATGCCGTTCCGGTACATTGCGCGGCGGCACTTGTTATAGGCCGCCGG GCGATGGGTTTCAAGGAACGGATAACGAAAGAAATGAAGCAATTGGTGAACCGTATAAAGCAAAACCTGACCTGGAAAGT CAATCCTGATATACCGAGGGAAGGAAAAGGAATGACCCGTAAGGTCAGGGCCTGCTTGAGGCAGCTGGACAGGAAGCTTC CTGTGCACAACGGGTTTGCCCCGTGGCAGCAAGAAGCATACTACTCCGTCTGGCACGACCTGAAGTTATTGGCCCTGTCC TTGCGGTGA
Upstream 100 bases:
>100_bases GTCCGGGACTTGTTAGCCATAGTAACTTCTTTTTCGGCCCGACTGTATGGTGTAAAGGGTGGCAGGAAAATCCGGCGGGG TTTCCGGGAGCTGATAAGGG
Downstream 100 bases:
>100_bases CCCCGTTTAGCCGGTACCGGACAAACCGGTAGGCGTCCTAACAGGACGCGGGAGGCGGGGCTGGTTCCCCACCGGGAGGC CGACACAATCCGGTGGAAGT
Product: ISChy7, transposase
Products: NA
Alternate protein names: Transposase N-Terminal Domain Protein; ISChy7 Transposase; Transposase OrfB Family
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MPKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEGTSRDEIKKLGQELFGLNSRY ADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPVMRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAE LEVYRENGTVPRVVFGGRKLWKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGRVQEPDFAQGCLALDTNPDGV ALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPNGFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPI TLEGLDFGKDRLDTSKKFNRMASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFAPWQQEAYYSVWHDLKLLALS LR
Sequences:
>Translated_562_residues MPKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEGTSRDEIKKLGQELFGLNSRY ADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPVMRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAE LEVYRENGTVPRVVFGGRKLWKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGRVQEPDFAQGCLALDTNPDGV ALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPNGFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPI TLEGLDFGKDRLDTSKKFNRMASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFAPWQQEAYYSVWHDLKLLALS LR >Mature_561_residues PKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEGTSRDEIKKLGQELFGLNSRYA DDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPVMRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAEL EVYRENGTVPRVVFGGRKLWKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGED VLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGRVQEPDFAQGCLALDTNPDGVA LCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPNGFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPIT LEGLDFGKDRLDTSKKFNRMASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRRA MGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFAPWQQEAYYSVWHDLKLLALSL R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64609; Mature: 64478
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEG CCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TSRDEIKKLGQELFGLNSRYADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPV CCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAELEVYRENGTVPRVVFGGRKL HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHH WKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHCH DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGR HHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCC VQEPDFAQGCLALDTNPDGVALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPN CCCCCHHCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC GFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPITLEGLDFGKDRLDTSKKFNR CEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH MASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFA HCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PWQQEAYYSVWHDLKLLALSLR CHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure PKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEG CCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TSRDEIKKLGQELFGLNSRYADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPV CCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAELEVYRENGTVPRVVFGGRKL HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHH WKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHCH DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGR HHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCC VQEPDFAQGCLALDTNPDGVALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPN CCCCCHHCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC GFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPITLEGLDFGKDRLDTSKKFNR CEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH MASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFA HCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PWQQEAYYSVWHDLKLLALSLR CHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA