Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78044812

Identifier: 78044812

GI number: 78044812

Start: 326302

End: 327990

Strand: Direct

Name: 78044812

Synonym: CHY_0382

Alternate gene names: NA

Gene position: 326302-327990 (Clockwise)

Preceding gene: 78043896

Following gene: 78042736

Centisome position: 13.59

GC content: 53.4

Gene sequence:

>1689_bases
ATGCCGAAGAAGCAGGAGAAAGATGAATTTAGCTTTACAGTGTGCGGGGAGTTCTTCCCGGAAGTTTACCCGTCCTATCG
GTCTTCTAAATGGAGCAGGGGCGGGGAAGACCCTCTTGTCACAGAGATGCGGCTTTTCTGCGCCTGTATGCGGTGGGCCT
TTAACCGGCTTCTGGAAGGCACTTCCCGCGACGAGATTAAAAAACTCGGTCAGGAACTTTTTGGGCTAAACTCCCGGTAT
GCGGACGACGCCAGGCTTAAGGCACAAGGTGTGCTGGACAGCCAAAAAAAGCTTCTGGAGCTGGAGATTGAGGAAACGGA
AAAGAAATTGGGCCGGGCAAGGAAAAAGCTCGGCCCGGTTATGAGGAAGCTGGCAAAGGCAGAGGAAAAAGGAGCTACAC
CGGAAGTTATTGAAAAGCTCCGTTTAGCGGTCAAGGGACGGAACAACCGGGTAGCGTCTTTAGAGAAGAAGCTGGCTGAA
CTGGAAGTATACCGGGAGAACGGGACTGTACCCAGGGTAGTATTTGGCGGGAGAAAACTTTGGAAAAGAGTCAGCAGGGG
CCGGGCCACACGGGAGGAATGGCAGGCCACACGCAAAAACCGTCTCTATTCCCGGGGCGACGAGACCAAGGGCAGCAACC
CGAACATAAAGGTAACTTACCGGGATGGGGAATTCCACCTGGCGGTGACTGTTTCCCACCTCTCGGAAAAGGTGGGCGAA
GACGTCCTGGGCCGCCCGAAGATGAACCGCGCTCCAAGAGTGGAGGGCAGGTTGTGGTTGCCGGAGAAACACCGGGAACT
GGTGCGGATATGGCTGACCATGAGGCTGCCCTACACAGTAGAACTTATACGCACCCTGGAGGGCCGCTATATAGTGCATC
TGACGTTTAATTTTGGCAGGGTACAGGAGCCCGACTTTGCTCAGGGTTGTTTAGCCCTGGACACCAACCCTGATGGAGTG
GCCTTGTGCAATGTAAACGCTTCAGGCCAGCCGGAACCCTGGCCGGAAGGTTTTAGCATCCTTTATCCGGGCAACCCGGG
CAAATATGAAAGAGAATTTCAGGTCATCACTTACCCGAACGGTTTTCTTTGCATCAAGGTGCCCGATCTAACTTATGCTT
CCGGCTTCCGGCGGGATTACCTGATAGGCGTTTTAGCTAAATTGGTGGTAGACATTGCCCTCTTTTTGGGCAAGCCTATC
ACCCTGGAGGGTTTAGATTTTGGTAAAGACAGGCTGGACACCAGCAAGAAGTTTAACCGCATGGCTTCCAACTTTCCCTT
TGCCAAGATGGTGGAGGCGATGTGCCGGAGGGCGGTCAAAGAGGGAGTATCTTTTAAGGTAGTAGCTGCCCGGCACACGT
CCACCATAGGTTACTGGAAGTACATGAAGCGTTATGCCGTTCCGGTACATTGCGCGGCGGCACTTGTTATAGGCCGCCGG
GCGATGGGTTTCAAGGAACGGATAACGAAAGAAATGAAGCAATTGGTGAACCGTATAAAGCAAAACCTGACCTGGAAAGT
CAATCCTGATATACCGAGGGAAGGAAAAGGAATGACCCGTAAGGTCAGGGCCTGCTTGAGGCAGCTGGACAGGAAGCTTC
CTGTGCACAACGGGTTTGCCCCGTGGCAGCAAGAAGCATACTACTCCGTCTGGCACGACCTGAAGTTATTGGCCCTGTCC
TTGCGGTGA

Upstream 100 bases:

>100_bases
GTCCGGGACTTGTTAGCCATAGTAACTTCTTTTTCGGCCCGACTGTATGGTGTAAAGGGTGGCAGGAAAATCCGGCGGGG
TTTCCGGGAGCTGATAAGGG

Downstream 100 bases:

>100_bases
CCCCGTTTAGCCGGTACCGGACAAACCGGTAGGCGTCCTAACAGGACGCGGGAGGCGGGGCTGGTTCCCCACCGGGAGGC
CGACACAATCCGGTGGAAGT

Product: ISChy7, transposase

Products: NA

Alternate protein names: Transposase N-Terminal Domain Protein; ISChy7 Transposase; Transposase OrfB Family

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MPKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEGTSRDEIKKLGQELFGLNSRY
ADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPVMRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAE
LEVYRENGTVPRVVFGGRKLWKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE
DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGRVQEPDFAQGCLALDTNPDGV
ALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPNGFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPI
TLEGLDFGKDRLDTSKKFNRMASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR
AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFAPWQQEAYYSVWHDLKLLALS
LR

Sequences:

>Translated_562_residues
MPKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEGTSRDEIKKLGQELFGLNSRY
ADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPVMRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAE
LEVYRENGTVPRVVFGGRKLWKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE
DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGRVQEPDFAQGCLALDTNPDGV
ALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPNGFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPI
TLEGLDFGKDRLDTSKKFNRMASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR
AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFAPWQQEAYYSVWHDLKLLALS
LR
>Mature_561_residues
PKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEGTSRDEIKKLGQELFGLNSRYA
DDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPVMRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAEL
EVYRENGTVPRVVFGGRKLWKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGED
VLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGRVQEPDFAQGCLALDTNPDGVA
LCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPNGFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPIT
LEGLDFGKDRLDTSKKFNRMASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRRA
MGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFAPWQQEAYYSVWHDLKLLALSL
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64609; Mature: 64478

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEG
CCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
TSRDEIKKLGQELFGLNSRYADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPV
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAELEVYRENGTVPRVVFGGRKL
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHH
WKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHCH
DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGR
HHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCC
VQEPDFAQGCLALDTNPDGVALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPN
CCCCCHHCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC
GFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPITLEGLDFGKDRLDTSKKFNR
CEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH
MASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR
HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFA
HCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PWQQEAYYSVWHDLKLLALSLR
CHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
PKKQEKDEFSFTVCGEFFPEVYPSYRSSKWSRGGEDPLVTEMRLFCACMRWAFNRLLEG
CCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
TSRDEIKKLGQELFGLNSRYADDARLKAQGVLDSQKKLLELEIEETEKKLGRARKKLGPV
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRKLAKAEEKGATPEVIEKLRLAVKGRNNRVASLEKKLAELEVYRENGTVPRVVFGGRKL
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHH
WKRVSRGRATREEWQATRKNRLYSRGDETKGSNPNIKVTYRDGEFHLAVTVSHLSEKVGE
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHCH
DVLGRPKMNRAPRVEGRLWLPEKHRELVRIWLTMRLPYTVELIRTLEGRYIVHLTFNFGR
HHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCC
VQEPDFAQGCLALDTNPDGVALCNVNASGQPEPWPEGFSILYPGNPGKYEREFQVITYPN
CCCCCHHCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC
GFLCIKVPDLTYASGFRRDYLIGVLAKLVVDIALFLGKPITLEGLDFGKDRLDTSKKFNR
CEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH
MASNFPFAKMVEAMCRRAVKEGVSFKVVAARHTSTIGYWKYMKRYAVPVHCAAALVIGRR
HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AMGFKERITKEMKQLVNRIKQNLTWKVNPDIPREGKGMTRKVRACLRQLDRKLPVHNGFA
HCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PWQQEAYYSVWHDLKLLALSLR
CHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA