Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044787

Identifier: 78044787

GI number: 78044787

Start: 1255545

End: 1256612

Strand: Direct

Name: 78044787

Synonym: CHY_1402

Alternate gene names: NA

Gene position: 1255545-1256612 (Clockwise)

Preceding gene: 78044639

Following gene: 78042710

Centisome position: 52.28

GC content: 36.42

Gene sequence:

>1068_bases
ATGAAAGTTGCGATAATTGGTGCCGGTTTAGCGGGACTTGCTACTGCTTTTCAATTAGACAGGTATAAAATACCTTACAT
AGTTTTTGACCGTCGCTATCAGCCGGGCGATCCTACCCCTCACATTGCGGTAAGTTTAAAAGTTATAAACCGCCCTGTTA
AAGATATTGTAAGCTATTTTTATAAAAAATATGATTTACCCCTTGTCCCTTATCGAAAAATTACAAAAATATTGATGAAT
TCACCAGGAAACTTTGCAACAGTTCGCGGCAGTAATCTGGGCTATTTTTGGCTGAGAGGACATTTTCACAACTCTTTAGA
AAACCAGCTATTGAGGTTAATCAAGGGAGAAGTAAGATTTAAATCACCCCAGGATCCAGAACATTTAAAAGATGCTTTTT
CTCACGTAGTTGTTGCTACCGGTAGTCCGATTATCGCTAATTCTTATGGTATATTTCATAAATTGTTTGACGGATGGGTC
ATAGGCTCGAATATTTCAGGGAATTTTGATCCAGAAGAGTTAGTAATGTGGATTGATACCGACTATGCCAAAAACGGCTA
TGCTTATTTAACCCCCTTTGATACAAAAAACGCTTCCTTATGCCTCGCCATAAACGACATAACAGAAAATCAGCTCAGCC
ACTACTGGCAGGTTTTTTGGCAAAAAGAAAAATTACCCTATAAAATTATCGAAACTTTTACGGTAAATCACATCGTGGGC
TACCTTACTACAAATCAGCTTAATAATATTTATTTTACCGGCGGGGCTGGAGGATTAATCGAGCCTTTCTTGGGTTTTGG
TATTTTTTATTCAATTATTTCAGGTATTTTAGTTGCAAAAGCCATCAAAGAAAATTTATCCTATGATACATTATTAAATC
CCATAAAGCAAGCGGTTCGGCAGTTCGATATTCTTCGCATCGGTCTAAATAAATTAAACAACAACTCCTTTGACTTTTTA
ACAGGATTACTTTCTTTTAGACCTTTAAATTATCTTCTCTATCACCTGCCCTTTGATTCCGTAAAATTGATAAGTTACCT
GTTTGCTAAAGGAGGTTTAAAACGTTGA

Upstream 100 bases:

>100_bases
TTTTTTTTCTCGGTCTTAAAAATACGACAATAATCAATAAATTAAATAAAAAGTACAAGTACCAGAACATCTTTACCTCC
TGGTGAGCGAGGGATTACTT

Downstream 100 bases:

>100_bases
AGGTAGCTATCGTTGGTGGAGGATTTGCTGGACTTTTAACAGCCTGCCTGCTGGAAAAAAAGAAAATAGATTATCTTCTT
TTTGAAGAAAAGCGAATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Dehydrogenase; FAD Dependent Dehydrogenase; FAD-Dependent Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Dehydrogenase

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYFYKKYDLPLVPYRKITKILMN
SPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRFKSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWV
IGSNISGNFDPEELVMWIDTDYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG
YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVRQFDILRIGLNKLNNNSFDFL
TGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR

Sequences:

>Translated_355_residues
MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYFYKKYDLPLVPYRKITKILMN
SPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRFKSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWV
IGSNISGNFDPEELVMWIDTDYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG
YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVRQFDILRIGLNKLNNNSFDFL
TGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR
>Mature_355_residues
MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYFYKKYDLPLVPYRKITKILMN
SPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRFKSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWV
IGSNISGNFDPEELVMWIDTDYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG
YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVRQFDILRIGLNKLNNNSFDFL
TGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40368; Mature: 40368

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYF
CEEEEEECCHHHHHHHHHHCCEECCEEEEECCCCCCCCCCEEEEEEHHHCCCHHHHHHHH
YKKYDLPLVPYRKITKILMNSPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRF
HHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCC
KSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWVIGSNISGNFDPEELVMWIDT
CCCCCHHHHHHHHHEEEEECCCCEEECCHHHHHHHHCCEEEECCCCCCCCHHHEEEEEEC
DYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG
CCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE
YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVR
EEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QFDILRIGLNKLNNNSFDFLTGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR
HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYF
CEEEEEECCHHHHHHHHHHCCEECCEEEEECCCCCCCCCCEEEEEEHHHCCCHHHHHHHH
YKKYDLPLVPYRKITKILMNSPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRF
HHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCC
KSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWVIGSNISGNFDPEELVMWIDT
CCCCCHHHHHHHHHEEEEECCCCEEECCHHHHHHHHCCEEEECCCCCCCCHHHEEEEEEC
DYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG
CCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE
YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVR
EEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QFDILRIGLNKLNNNSFDFLTGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR
HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA