| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044787
Identifier: 78044787
GI number: 78044787
Start: 1255545
End: 1256612
Strand: Direct
Name: 78044787
Synonym: CHY_1402
Alternate gene names: NA
Gene position: 1255545-1256612 (Clockwise)
Preceding gene: 78044639
Following gene: 78042710
Centisome position: 52.28
GC content: 36.42
Gene sequence:
>1068_bases ATGAAAGTTGCGATAATTGGTGCCGGTTTAGCGGGACTTGCTACTGCTTTTCAATTAGACAGGTATAAAATACCTTACAT AGTTTTTGACCGTCGCTATCAGCCGGGCGATCCTACCCCTCACATTGCGGTAAGTTTAAAAGTTATAAACCGCCCTGTTA AAGATATTGTAAGCTATTTTTATAAAAAATATGATTTACCCCTTGTCCCTTATCGAAAAATTACAAAAATATTGATGAAT TCACCAGGAAACTTTGCAACAGTTCGCGGCAGTAATCTGGGCTATTTTTGGCTGAGAGGACATTTTCACAACTCTTTAGA AAACCAGCTATTGAGGTTAATCAAGGGAGAAGTAAGATTTAAATCACCCCAGGATCCAGAACATTTAAAAGATGCTTTTT CTCACGTAGTTGTTGCTACCGGTAGTCCGATTATCGCTAATTCTTATGGTATATTTCATAAATTGTTTGACGGATGGGTC ATAGGCTCGAATATTTCAGGGAATTTTGATCCAGAAGAGTTAGTAATGTGGATTGATACCGACTATGCCAAAAACGGCTA TGCTTATTTAACCCCCTTTGATACAAAAAACGCTTCCTTATGCCTCGCCATAAACGACATAACAGAAAATCAGCTCAGCC ACTACTGGCAGGTTTTTTGGCAAAAAGAAAAATTACCCTATAAAATTATCGAAACTTTTACGGTAAATCACATCGTGGGC TACCTTACTACAAATCAGCTTAATAATATTTATTTTACCGGCGGGGCTGGAGGATTAATCGAGCCTTTCTTGGGTTTTGG TATTTTTTATTCAATTATTTCAGGTATTTTAGTTGCAAAAGCCATCAAAGAAAATTTATCCTATGATACATTATTAAATC CCATAAAGCAAGCGGTTCGGCAGTTCGATATTCTTCGCATCGGTCTAAATAAATTAAACAACAACTCCTTTGACTTTTTA ACAGGATTACTTTCTTTTAGACCTTTAAATTATCTTCTCTATCACCTGCCCTTTGATTCCGTAAAATTGATAAGTTACCT GTTTGCTAAAGGAGGTTTAAAACGTTGA
Upstream 100 bases:
>100_bases TTTTTTTTCTCGGTCTTAAAAATACGACAATAATCAATAAATTAAATAAAAAGTACAAGTACCAGAACATCTTTACCTCC TGGTGAGCGAGGGATTACTT
Downstream 100 bases:
>100_bases AGGTAGCTATCGTTGGTGGAGGATTTGCTGGACTTTTAACAGCCTGCCTGCTGGAAAAAAAGAAAATAGATTATCTTCTT TTTGAAGAAAAGCGAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Dehydrogenase; FAD Dependent Dehydrogenase; FAD-Dependent Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Dehydrogenase
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYFYKKYDLPLVPYRKITKILMN SPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRFKSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWV IGSNISGNFDPEELVMWIDTDYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVRQFDILRIGLNKLNNNSFDFL TGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR
Sequences:
>Translated_355_residues MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYFYKKYDLPLVPYRKITKILMN SPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRFKSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWV IGSNISGNFDPEELVMWIDTDYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVRQFDILRIGLNKLNNNSFDFL TGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR >Mature_355_residues MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYFYKKYDLPLVPYRKITKILMN SPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRFKSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWV IGSNISGNFDPEELVMWIDTDYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVRQFDILRIGLNKLNNNSFDFL TGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40368; Mature: 40368
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYF CEEEEEECCHHHHHHHHHHCCEECCEEEEECCCCCCCCCCEEEEEEHHHCCCHHHHHHHH YKKYDLPLVPYRKITKILMNSPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRF HHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCC KSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWVIGSNISGNFDPEELVMWIDT CCCCCHHHHHHHHHEEEEECCCCEEECCHHHHHHHHCCEEEECCCCCCCCHHHEEEEEEC DYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG CCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVR EEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QFDILRIGLNKLNNNSFDFLTGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKVAIIGAGLAGLATAFQLDRYKIPYIVFDRRYQPGDPTPHIAVSLKVINRPVKDIVSYF CEEEEEECCHHHHHHHHHHCCEECCEEEEECCCCCCCCCCEEEEEEHHHCCCHHHHHHHH YKKYDLPLVPYRKITKILMNSPGNFATVRGSNLGYFWLRGHFHNSLENQLLRLIKGEVRF HHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCC KSPQDPEHLKDAFSHVVVATGSPIIANSYGIFHKLFDGWVIGSNISGNFDPEELVMWIDT CCCCCHHHHHHHHHEEEEECCCCEEECCHHHHHHHHCCEEEECCCCCCCCHHHEEEEEEC DYAKNGYAYLTPFDTKNASLCLAINDITENQLSHYWQVFWQKEKLPYKIIETFTVNHIVG CCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE YLTTNQLNNIYFTGGAGGLIEPFLGFGIFYSIISGILVAKAIKENLSYDTLLNPIKQAVR EEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QFDILRIGLNKLNNNSFDFLTGLLSFRPLNYLLYHLPFDSVKLISYLFAKGGLKR HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA