| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is ywrB [H]
Identifier: 78044772
GI number: 78044772
Start: 535176
End: 535700
Strand: Direct
Name: ywrB [H]
Synonym: CHY_0620
Alternate gene names: 78044772
Gene position: 535176-535700 (Clockwise)
Preceding gene: 78044816
Following gene: 78044523
Centisome position: 22.28
GC content: 38.48
Gene sequence:
>525_bases ATGCAGTCAATAATTAACTTATTTCTGGCTTTTTTAAAAGTAGGGGCGTTCTCCTTTGGGGGAGCGTACTCTTTAATTCC CATAATTGAAAGGGAAGTGGTGGAACATTACCGGTGGCTGACCAAAGACGAATTTATGGAAGTACTGGGAATAACCCAGG CTATTCCGGGAGCAATTTCCGCCAAATTTGCTACCTATACCGGTTACAAAGTTGCAGGTATAATAGGAGTGGTTGTTGCC AATATTGGTAATATTCTACCACCGGTTTTATTAATGCTTAGCTTAATCGGGATACTCTTTAAAATTGGCCATCATCCGCT AACTAAAAATTTTATAAAGGGAGTAAAATACGGTACCTTTGCGATGGTACTGGGCTTTGGGGTGTCAATGCTTTTAAAGA CAAGTTTTGCAGTAAAAGGATATATAATTGCTGCGCTGGTTTTTACCGCGGTAGCTTTTTTTAATTTTGATCCCGCTTTA ACCATTGTTGGAGCAGGAATTTTAGGTATAATCTTATTTAAATAG
Upstream 100 bases:
>100_bases GACGGACTTAAGCTTTTAGAAAAATATGGGGAATTTCGCAACCGTGCCCAGGATTATCTGGATGAATTGTTTGCGGCTTA TTTTAAGGAGGAGTAAGGTA
Downstream 100 bases:
>100_bases AGGTGGAAATAATGAAAAAAGTTCCGGTGCAGGAAGCGATAGGGATGGTATTATGCCACGATATAACCAAAATCGTCCCG GGAGAATTTAAAGGTCCTGC
Product: putative chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MQSIINLFLAFLKVGAFSFGGAYSLIPIIEREVVEHYRWLTKDEFMEVLGITQAIPGAISAKFATYTGYKVAGIIGVVVA NIGNILPPVLLMLSLIGILFKIGHHPLTKNFIKGVKYGTFAMVLGFGVSMLLKTSFAVKGYIIAALVFTAVAFFNFDPAL TIVGAGILGIILFK
Sequences:
>Translated_174_residues MQSIINLFLAFLKVGAFSFGGAYSLIPIIEREVVEHYRWLTKDEFMEVLGITQAIPGAISAKFATYTGYKVAGIIGVVVA NIGNILPPVLLMLSLIGILFKIGHHPLTKNFIKGVKYGTFAMVLGFGVSMLLKTSFAVKGYIIAALVFTAVAFFNFDPAL TIVGAGILGIILFK >Mature_174_residues MQSIINLFLAFLKVGAFSFGGAYSLIPIIEREVVEHYRWLTKDEFMEVLGITQAIPGAISAKFATYTGYKVAGIIGVVVA NIGNILPPVLLMLSLIGILFKIGHHPLTKNFIKGVKYGTFAMVLGFGVSMLLKTSFAVKGYIIAALVFTAVAFFNFDPAL TIVGAGILGIILFK
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18764; Mature: 18764
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIINLFLAFLKVGAFSFGGAYSLIPIIEREVVEHYRWLTKDEFMEVLGITQAIPGAIS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH AKFATYTGYKVAGIIGVVVANIGNILPPVLLMLSLIGILFKIGHHPLTKNFIKGVKYGTF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH AMVLGFGVSMLLKTSFAVKGYIIAALVFTAVAFFNFDPALTIVGAGILGIILFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQSIINLFLAFLKVGAFSFGGAYSLIPIIEREVVEHYRWLTKDEFMEVLGITQAIPGAIS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH AKFATYTGYKVAGIIGVVVANIGNILPPVLLMLSLIGILFKIGHHPLTKNFIKGVKYGTF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH AMVLGFGVSMLLKTSFAVKGYIIAALVFTAVAFFNFDPALTIVGAGILGIILFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]