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The map label for this gene is fadF [H]

Identifier: 78044753

GI number: 78044753

Start: 1184270

End: 1186318

Strand: Direct

Name: fadF [H]

Synonym: CHY_1327

Alternate gene names: 78044753

Gene position: 1184270-1186318 (Clockwise)

Preceding gene: 78043408

Following gene: 78044198

Centisome position: 49.31

GC content: 43.92

Gene sequence:

>2049_bases
GTGAATGGAATTCCCCAGCGGGAACTTTACTGGAATATAAACCACACAGCCAAGTTTTTAATGTACCCGTTGTTTTTAAT
CGCCCTGGCAATTTTCGCCTATGGGATGTACCAGCGGTATCAATACTGGAAAATAGGGCAAAAAGCCAGTGTTAAGTGGG
ATTTCGGAAGATTCTTAAAAGAAACGTTTTTCCAAAGAAGAATCTTAAACGAACTGTATCCCGGCTTAATGCATTTTGGT
ATCTTCTGGGGTTTTACTGTCTTGTTTTTAACCACTTTAATAGTGGCAATTCAGGCAGACTTCGGGATTAAAGTATTTAC
CGGCAACGTTTATTTACTTTTTAGCTTTTTAGCCGATGTAGGTGGGGTTGCAGCAATCATTGGTATTTTAATGGCTATTA
TTTGCCGCTATATTATAAAGCCAGATCGTCTCGATAACAAGCCTGATGATTTAATTTCATTGCTTTTAATTTTAACAATT
TTGGTTACCGGTTATATCGTCGAAGGAATCCGCATGGCAGTGGCCGGGGATAACTGGGCGGCCTATTCGCCTTTTGGCAA
TTTAGTGGCCCAGCTATTTGCCGGAGCCGATGAAGGAATCCTCAGGCTGTGGCATGTTATTCTCTGGTGGGGGCATATGC
TTTTAGCCTTTGGCTTTATTGCTTATATTCCGTATTCCAAATTAATTCACCTCTTCACTGCTCCCATCAACCAGGCTTTG
GCGGATCCCCAGAGTGCCAAGACCTTCCCCTTAATTGATTTGGAAGCTGAAGATGCAGAATCCTTTGGGGTATCGACGGT
TGAAGAGTTTACCCAGAAACAGCTTTTAGATTTGGATAGCTGTACCCGCTGCGGACGGTGTCAGGATAACTGCCCCGCTT
ATCTTACGAAAAAGCCGTTATCGCCCAAGAAAATGACCCAGGACCTGAAAGAGGCTCTAAACGAAAGAGCACCGGTGATA
ATTGCCAGAGCCAAAGCCGAACTGGTCAAAAAAGGATTGGGGGAAGAAGCGGCAACCAGTGAAGTGGAAGGTGCGGTTAC
AAGGGCATTAATCGGGGAGGTAATTGAAGAAGATACGATTTGGTCGTGTACTACCTGCCGGGCATGTCAGGAAGTCTGTC
CGGTATACGTAGAGCACATTCCGAAAACAATAGAGTTAAGAAGAAATTTAGTCCTAATGGAAAGCTCCTTTCCGCAGGAA
GTACAGCTTACTTTTAGGAATATGGAAAATAACGGTAACCCCTGGGGTGTGGGCTGGGCCAGTAGAGCGGACTGGGCGGA
AGGTTTGGATGTGCCAATCCTGGGAGAGATGGAAAACCCCGAAGAAATAGAATATCTCTACTGGGTTGGCTGTGCCGGTT
CCTTTGATGAAAGAAACAAAAAAGTCTCTCGGGCCTTAGTTAAAATCCTTAAAGCAGCAGGGATTAAGTTTGCCATTTTA
GGTACCGAAGAAAAATGCTGTGGCGACTCTGCCCGGAGAATTGGTAATGAATATTTATACCAGATGCTTGCCCAGGAAAA
TATTGAAACCATGAATAATTATAAAGTTAAGAAAATTATTACCGCCTGTCCACACTGCTATAATACTTTGAAAAATGATT
ACCCGCAGTTTGGCGGTAATTACGAGGTGATCCACCACAGCGAGCTAATTGCCAAGCTTCTTTCAGAAAATAAGATAAAG
TTAAACAGCACCGATAACCGTCGCTTTACCTATCACGATTCCTGTTACCTGGGACGGTATAACCGGGTATTTAATGAGCC
AAGGGAAGTATTAAAGAAGGTAGGAGTAAAATTAACCGAAATGAGCAGGAACAGAGAAACCAGTTTTTGCTGCGGCGCTG
GTGGTGGACGGATGTGGATGGAAGAAACTTTAGGGGAACGGATTAACGTTGAGCGTACGCGGCAAGCTTTAGCTACCAAC
CCGGAGGGAATTGCGGTAAACTGCCCGTACTGCCTTACCATGCTTGAAGATGGAATAAAGGCATTTGATAAGACCGAGGA
AGTTAAAGTTTACGATATTGCAGAGTTAGTGGCTGAGAAGCTTAATTAA

Upstream 100 bases:

>100_bases
GTTTAAAAAGCTTTTAAAATCGTAAAGGAAGGCATTTTTGCCTTCCTTCTCTAATAAATTTTGTTTAGAAAAAATTGCAA
ACAAAAGGGGAGGGATTAGG

Downstream 100 bases:

>100_bases
TTTTTATATTCGAATTAAAATTATGCCGTTTTGCATAAATAATTAAATTTTATAATCCACCAATACTTTGGGTCTGTTCC
GCTGAAATACCATAAGCGGG

Product: putative iron-sulfur-binding reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MNGIPQRELYWNINHTAKFLMYPLFLIALAIFAYGMYQRYQYWKIGQKASVKWDFGRFLKETFFQRRILNELYPGLMHFG
IFWGFTVLFLTTLIVAIQADFGIKVFTGNVYLLFSFLADVGGVAAIIGILMAIICRYIIKPDRLDNKPDDLISLLLILTI
LVTGYIVEGIRMAVAGDNWAAYSPFGNLVAQLFAGADEGILRLWHVILWWGHMLLAFGFIAYIPYSKLIHLFTAPINQAL
ADPQSAKTFPLIDLEAEDAESFGVSTVEEFTQKQLLDLDSCTRCGRCQDNCPAYLTKKPLSPKKMTQDLKEALNERAPVI
IARAKAELVKKGLGEEAATSEVEGAVTRALIGEVIEEDTIWSCTTCRACQEVCPVYVEHIPKTIELRRNLVLMESSFPQE
VQLTFRNMENNGNPWGVGWASRADWAEGLDVPILGEMENPEEIEYLYWVGCAGSFDERNKKVSRALVKILKAAGIKFAIL
GTEEKCCGDSARRIGNEYLYQMLAQENIETMNNYKVKKIITACPHCYNTLKNDYPQFGGNYEVIHHSELIAKLLSENKIK
LNSTDNRRFTYHDSCYLGRYNRVFNEPREVLKKVGVKLTEMSRNRETSFCCGAGGGRMWMEETLGERINVERTRQALATN
PEGIAVNCPYCLTMLEDGIKAFDKTEEVKVYDIAELVAEKLN

Sequences:

>Translated_682_residues
MNGIPQRELYWNINHTAKFLMYPLFLIALAIFAYGMYQRYQYWKIGQKASVKWDFGRFLKETFFQRRILNELYPGLMHFG
IFWGFTVLFLTTLIVAIQADFGIKVFTGNVYLLFSFLADVGGVAAIIGILMAIICRYIIKPDRLDNKPDDLISLLLILTI
LVTGYIVEGIRMAVAGDNWAAYSPFGNLVAQLFAGADEGILRLWHVILWWGHMLLAFGFIAYIPYSKLIHLFTAPINQAL
ADPQSAKTFPLIDLEAEDAESFGVSTVEEFTQKQLLDLDSCTRCGRCQDNCPAYLTKKPLSPKKMTQDLKEALNERAPVI
IARAKAELVKKGLGEEAATSEVEGAVTRALIGEVIEEDTIWSCTTCRACQEVCPVYVEHIPKTIELRRNLVLMESSFPQE
VQLTFRNMENNGNPWGVGWASRADWAEGLDVPILGEMENPEEIEYLYWVGCAGSFDERNKKVSRALVKILKAAGIKFAIL
GTEEKCCGDSARRIGNEYLYQMLAQENIETMNNYKVKKIITACPHCYNTLKNDYPQFGGNYEVIHHSELIAKLLSENKIK
LNSTDNRRFTYHDSCYLGRYNRVFNEPREVLKKVGVKLTEMSRNRETSFCCGAGGGRMWMEETLGERINVERTRQALATN
PEGIAVNCPYCLTMLEDGIKAFDKTEEVKVYDIAELVAEKLN
>Mature_682_residues
MNGIPQRELYWNINHTAKFLMYPLFLIALAIFAYGMYQRYQYWKIGQKASVKWDFGRFLKETFFQRRILNELYPGLMHFG
IFWGFTVLFLTTLIVAIQADFGIKVFTGNVYLLFSFLADVGGVAAIIGILMAIICRYIIKPDRLDNKPDDLISLLLILTI
LVTGYIVEGIRMAVAGDNWAAYSPFGNLVAQLFAGADEGILRLWHVILWWGHMLLAFGFIAYIPYSKLIHLFTAPINQAL
ADPQSAKTFPLIDLEAEDAESFGVSTVEEFTQKQLLDLDSCTRCGRCQDNCPAYLTKKPLSPKKMTQDLKEALNERAPVI
IARAKAELVKKGLGEEAATSEVEGAVTRALIGEVIEEDTIWSCTTCRACQEVCPVYVEHIPKTIELRRNLVLMESSFPQE
VQLTFRNMENNGNPWGVGWASRADWAEGLDVPILGEMENPEEIEYLYWVGCAGSFDERNKKVSRALVKILKAAGIKFAIL
GTEEKCCGDSARRIGNEYLYQMLAQENIETMNNYKVKKIITACPHCYNTLKNDYPQFGGNYEVIHHSELIAKLLSENKIK
LNSTDNRRFTYHDSCYLGRYNRVFNEPREVLKKVGVKLTEMSRNRETSFCCGAGGGRMWMEETLGERINVERTRQALATN
PEGIAVNCPYCLTMLEDGIKAFDKTEEVKVYDIAELVAEKLN

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 77327; Mature: 77327

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGIPQRELYWNINHTAKFLMYPLFLIALAIFAYGMYQRYQYWKIGQKASVKWDFGRFLK
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ETFFQRRILNELYPGLMHFGIFWGFTVLFLTTLIVAIQADFGIKVFTGNVYLLFSFLADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH
GGVAAIIGILMAIICRYIIKPDRLDNKPDDLISLLLILTILVTGYIVEGIRMAVAGDNWA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
AYSPFGNLVAQLFAGADEGILRLWHVILWWGHMLLAFGFIAYIPYSKLIHLFTAPINQAL
EECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ADPQSAKTFPLIDLEAEDAESFGVSTVEEFTQKQLLDLDSCTRCGRCQDNCPAYLTKKPL
CCCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
SPKKMTQDLKEALNERAPVIIARAKAELVKKGLGEEAATSEVEGAVTRALIGEVIEEDTI
CHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
WSCTTCRACQEVCPVYVEHIPKTIELRRNLVLMESSFPQEVQLTFRNMENNGNPWGVGWA
CCHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC
SRADWAEGLDVPILGEMENPEEIEYLYWVGCAGSFDERNKKVSRALVKILKAAGIKFAIL
CCCCHHCCCCCCEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
GTEEKCCGDSARRIGNEYLYQMLAQENIETMNNYKVKKIITACPHCYNTLKNDYPQFGGN
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHCCCCCCCCC
YEVIHHSELIAKLLSENKIKLNSTDNRRFTYHDSCYLGRYNRVFNEPREVLKKVGVKLTE
EEEEEHHHHHHHHHCCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHH
MSRNRETSFCCGAGGGRMWMEETLGERINVERTRQALATNPEGIAVNCPYCLTMLEDGIK
HHCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH
AFDKTEEVKVYDIAELVAEKLN
HHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGIPQRELYWNINHTAKFLMYPLFLIALAIFAYGMYQRYQYWKIGQKASVKWDFGRFLK
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ETFFQRRILNELYPGLMHFGIFWGFTVLFLTTLIVAIQADFGIKVFTGNVYLLFSFLADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH
GGVAAIIGILMAIICRYIIKPDRLDNKPDDLISLLLILTILVTGYIVEGIRMAVAGDNWA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
AYSPFGNLVAQLFAGADEGILRLWHVILWWGHMLLAFGFIAYIPYSKLIHLFTAPINQAL
EECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ADPQSAKTFPLIDLEAEDAESFGVSTVEEFTQKQLLDLDSCTRCGRCQDNCPAYLTKKPL
CCCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
SPKKMTQDLKEALNERAPVIIARAKAELVKKGLGEEAATSEVEGAVTRALIGEVIEEDTI
CHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
WSCTTCRACQEVCPVYVEHIPKTIELRRNLVLMESSFPQEVQLTFRNMENNGNPWGVGWA
CCHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC
SRADWAEGLDVPILGEMENPEEIEYLYWVGCAGSFDERNKKVSRALVKILKAAGIKFAIL
CCCCHHCCCCCCEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
GTEEKCCGDSARRIGNEYLYQMLAQENIETMNNYKVKKIITACPHCYNTLKNDYPQFGGN
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHCCCCCCCCC
YEVIHHSELIAKLLSENKIKLNSTDNRRFTYHDSCYLGRYNRVFNEPREVLKKVGVKLTE
EEEEEHHHHHHHHHCCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHH
MSRNRETSFCCGAGGGRMWMEETLGERINVERTRQALATNPEGIAVNCPYCLTMLEDGIK
HHCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH
AFDKTEEVKVYDIAELVAEKLN
HHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]