| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yqeC [C]
Identifier: 78044662
GI number: 78044662
Start: 607002
End: 607679
Strand: Direct
Name: yqeC [C]
Synonym: CHY_0693
Alternate gene names: 78044662
Gene position: 607002-607679 (Clockwise)
Preceding gene: 78043859
Following gene: 78043232
Centisome position: 25.28
GC content: 43.51
Gene sequence:
>678_bases ATGCTTAACTTTGCCGGTTACCAATTAAGTTATCCCGTGTGGTTAACCGGAGGCGGGGGCAAAACATCGCTAATGTATTA TTTAGCCCGCAGTCAGAAAGGTCCCCTTATTCTTACCACTTCTACGAAACTTGCTTACCCGCCCCGGAAGGAACTATCCT TTTACCAGTTACAAAAATTAGAAGAAGCATTACCACTGGTAAAAGACGAAAGAAAAATATTAGTAGGAAGCCGGGTAGAA AAGGAAAAAATCATTGGCTTTAGCCCGAAAGAATTAGACGCATTTTACCGGCAGTACAAGATTCCGCTTATAATCGAAGC CGATGGCAGTAACCGTCGGCCGTTGAAAATTCACTGGTCCCATGAGCCTGCTCTGCCAGAAGTTCCGGAGACGGTTATTG CTGTGGTAGGATTATCTGCACTAAATAAACCGTATTGCGGTGAGTATATTCACCGGGCCGAAGGAATCCCAGGAAAAACC ATTACGCCTGAAGTGCTGTATCAGCTTGTTTTGCTAGGAAAATATTTTGCTCCGAATACCAAAAAAAAGGTTATCTTTCT CAATCAAGCAGATGCTGTAGATAATAAACAGTTAATGAAGGTTCTGTCCCTGTTTAAAAGTAGTGGTGTTAACGTAACTT ACGGATCGCTCAGGGAGGGTTACATCTTGCCGGGGTAG
Upstream 100 bases:
>100_bases ATCTTAAATGCTATTTACAATGCGGTGGGCGTCAGAATTACCGAACTTCCGGCCACTCCGGAAAAGATCTTAAAAGCCCT AAAAGAAAAAGAGCAGAAAA
Downstream 100 bases:
>100_bases TGGGGGTTCTTATTTTGGCCGGGGGAAGTTCCCGGAGGATGGGGAAGGACAAATTGTCATTACCGTTATTTGGCAAAACG ATATTGGAGCAAACCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLNFAGYQLSYPVWLTGGGGKTSLMYYLARSQKGPLILTTSTKLAYPPRKELSFYQLQKLEEALPLVKDERKILVGSRVE KEKIIGFSPKELDAFYRQYKIPLIIEADGSNRRPLKIHWSHEPALPEVPETVIAVVGLSALNKPYCGEYIHRAEGIPGKT ITPEVLYQLVLLGKYFAPNTKKKVIFLNQADAVDNKQLMKVLSLFKSSGVNVTYGSLREGYILPG
Sequences:
>Translated_225_residues MLNFAGYQLSYPVWLTGGGGKTSLMYYLARSQKGPLILTTSTKLAYPPRKELSFYQLQKLEEALPLVKDERKILVGSRVE KEKIIGFSPKELDAFYRQYKIPLIIEADGSNRRPLKIHWSHEPALPEVPETVIAVVGLSALNKPYCGEYIHRAEGIPGKT ITPEVLYQLVLLGKYFAPNTKKKVIFLNQADAVDNKQLMKVLSLFKSSGVNVTYGSLREGYILPG >Mature_225_residues MLNFAGYQLSYPVWLTGGGGKTSLMYYLARSQKGPLILTTSTKLAYPPRKELSFYQLQKLEEALPLVKDERKILVGSRVE KEKIIGFSPKELDAFYRQYKIPLIIEADGSNRRPLKIHWSHEPALPEVPETVIAVVGLSALNKPYCGEYIHRAEGIPGKT ITPEVLYQLVLLGKYFAPNTKKKVIFLNQADAVDNKQLMKVLSLFKSSGVNVTYGSLREGYILPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082176, Length=196, Percent_Identity=29.0816326530612, Blast_Score=70, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25248; Mature: 25248
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFAGYQLSYPVWLTGGGGKTSLMYYLARSQKGPLILTTSTKLAYPPRKELSFYQLQKL CCCCCCEEEECCEEEECCCCCHHEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHH EEALPLVKDERKILVGSRVEKEKIIGFSPKELDAFYRQYKIPLIIEADGSNRRPLKIHWS HHHCCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEC HEPALPEVPETVIAVVGLSALNKPYCGEYIHRAEGIPGKTITPEVLYQLVLLGKYFAPNT CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC KKKVIFLNQADAVDNKQLMKVLSLFKSSGVNVTYGSLREGYILPG CCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEECCC >Mature Secondary Structure MLNFAGYQLSYPVWLTGGGGKTSLMYYLARSQKGPLILTTSTKLAYPPRKELSFYQLQKL CCCCCCEEEECCEEEECCCCCHHEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHH EEALPLVKDERKILVGSRVEKEKIIGFSPKELDAFYRQYKIPLIIEADGSNRRPLKIHWS HHHCCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEC HEPALPEVPETVIAVVGLSALNKPYCGEYIHRAEGIPGKTITPEVLYQLVLLGKYFAPNT CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC KKKVIFLNQADAVDNKQLMKVLSLFKSSGVNVTYGSLREGYILPG CCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA