| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044628
Identifier: 78044628
GI number: 78044628
Start: 1733978
End: 1734478
Strand: Direct
Name: 78044628
Synonym: CHY_1937
Alternate gene names: NA
Gene position: 1733978-1734478 (Clockwise)
Preceding gene: 78044046
Following gene: 78043348
Centisome position: 72.2
GC content: 41.92
Gene sequence:
>501_bases GTGAAAGAAGTTATTATTGCTTATTTTAAATCCCTGGAACAAACCGAACGGGCCATTGATTTTATTACCAATGCTCGCCT CGCAAACTCCCATATTTCTTTGATCTGCCCGGTAAACCCGTATACTGCACAAAAATTTAATGAAGAATATGCCATCGAGC TCACCGGTACCGGAGAAGTGGGTATGCTTCATGATTTTCATGGTCAGTTAGTCGAAATGCCGTTAGCTGAAGTTCCCGGT GTCGGCAAAGTTGCCTTGGCCGGCCCACTTTCCGATGATATTGCTAAAAAGGGGCTATTTAAAGCTCTTTTGCCTTTAGG ATTTACCGAAAGCAAGGTAAGAAAAATAAAAAAAGCCTTAAAAAATAACGAAGTGGTAGTTATAATCGAAACCGAAAAAG AAAAAGTAAACGAAGCGGCCAATATCTTAGCCGACTTTGGCGGAAGACATGTAGAAAAATGGAATCCTCACACCGAAAGG GCCTCAATCACCCACGGTTAG
Upstream 100 bases:
>100_bases TTGGTATTCGCTTTTTTCCTGAAAAATCCTGCCGGGATTTTTACATTATCCTCTGGTAATTTGACAAAAGCTATAAAAAA GTCGTTTAAGGAGGGATACC
Downstream 100 bases:
>100_bases AATTGACCAGACGCTTTAGTTTTAAAACTTCCGCGGGAGTTAAATAGCGAAAACTACCTTTTTTCAGGCCATATCCGGTT AAAAAGGCGATGCGCGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKEVIIAYFKSLEQTERAIDFITNARLANSHISLICPVNPYTAQKFNEEYAIELTGTGEVGMLHDFHGQLVEMPLAEVPG VGKVALAGPLSDDIAKKGLFKALLPLGFTESKVRKIKKALKNNEVVVIIETEKEKVNEAANILADFGGRHVEKWNPHTER ASITHG
Sequences:
>Translated_166_residues MKEVIIAYFKSLEQTERAIDFITNARLANSHISLICPVNPYTAQKFNEEYAIELTGTGEVGMLHDFHGQLVEMPLAEVPG VGKVALAGPLSDDIAKKGLFKALLPLGFTESKVRKIKKALKNNEVVVIIETEKEKVNEAANILADFGGRHVEKWNPHTER ASITHG >Mature_166_residues MKEVIIAYFKSLEQTERAIDFITNARLANSHISLICPVNPYTAQKFNEEYAIELTGTGEVGMLHDFHGQLVEMPLAEVPG VGKVALAGPLSDDIAKKGLFKALLPLGFTESKVRKIKKALKNNEVVVIIETEKEKVNEAANILADFGGRHVEKWNPHTER ASITHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18320; Mature: 18320
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVIIAYFKSLEQTERAIDFITNARLANSHISLICPVNPYTAQKFNEEYAIELTGTGEV CCHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHHHHCCCEEEEEEECCCCC GMLHDFHGQLVEMPLAEVPGVGKVALAGPLSDDIAKKGLFKALLPLGFTESKVRKIKKAL CEEEHHHHHHHHCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KNNEVVVIIETEKEKVNEAANILADFGGRHVEKWNPHTERASITHG CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKEVIIAYFKSLEQTERAIDFITNARLANSHISLICPVNPYTAQKFNEEYAIELTGTGEV CCHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHHHHCCCEEEEEEECCCCC GMLHDFHGQLVEMPLAEVPGVGKVALAGPLSDDIAKKGLFKALLPLGFTESKVRKIKKAL CEEEHHHHHHHHCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KNNEVVVIIETEKEKVNEAANILADFGGRHVEKWNPHTERASITHG CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA