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The map label for this gene is yedE [H]

Identifier: 78044623

GI number: 78044623

Start: 22437

End: 23648

Strand: Direct

Name: yedE [H]

Synonym: CHY_0029

Alternate gene names: 78044623

Gene position: 22437-23648 (Clockwise)

Preceding gene: 78045022

Following gene: 78044446

Centisome position: 0.93

GC content: 45.13

Gene sequence:

>1212_bases
ATGGGCGAAATTATCAAAAGCTATTACCAGAAAGTAATTGCGGAATTTTGGGACCAAAAGACTGCGGTCGTACTTCTGGG
CATTTTAAGCGGCCTTTACTTTGGAACAGTGGGCGTAGTCTGGGCGGTAACCGGAGAATTTACCCGCTGGGGGGCAAGTT
TTCTTAAATTAATCGGAGTGGACTTATCTCCTTATACTTATTTAAAAATCATCAAATATAAAGGTACCGTTTTAACCCGG
ATAGACGGGGTAATGGTGCTGGGAATGTTTGCGGGAGCCTTGATTGCAGCTCTTTTCGGGCAAAATTTTAAACTTAGAAT
TCCTACTGCTAAAAGGGTGCTCCAGGCTTTAATTGGCGGTATAATTGCTGGCTTTGGTACCCGTCTTGCTATGGGCTGTA
ACTTGGCTGCCCTTTTTACCGGAATACCTCAATTTTCCCTTCATACCTGGTTTTTTACCCTGGGAACAATTTTTGGTACC
TATATTGGAATAAAAATTACCCTCTCTCCTTATTTTCGGGGAGAGCCCAAACTGGTCAAAGCTTCGGAATTTAATGCGGG
AAATTTAAAGGCAAATACCCAGATCCAACCCTTTTTGGGCTGGCTTGGACTTATTGTTTTTGCCGGAATTTTATTGTCCC
GGCCGGAAATGCCGAATAATTTAAAACTTGCTACCGTTTTTGGCTTTGCCTTTGGCTTTTTAATTCAAAAGGGGCAGGTC
TGCTTTACCTCAGCCTTCCGGGATTTATGGTTGGTTGGACGCACGACTACGCTAAAGGCTCTGGTCTGGGGTATGGCGGT
GCAGATGCTTCTGACAGCGGCTTTTATCGCCAAGGGAACGCCTGCCAAAGTTCTCTGGGCCGGTCCCAATGCGTTAATTG
GTGGCCTTTTATTTGGTATTGGGATTGTTATTGCCGGAGGATGTGAGACCGGCTGGATGTACCGATCAATGGAAGGCCAG
GTTCACTTCTGGTTTGTAGGGTTGGGCAATGTGATTGGGGCAACAATCTTGTTCCTGGTGTGGGATAAGGGGGTTTATAA
ATACTTAGCCGAGCCGTTTCCGAAGTTTAGCTTGATAGAACATTTTGGTTACTTACCGGCCTTTATATTGACTGGATTAT
TCCTTTTAGGGCTGTACTTATGGGCGGATTTACGGGAAGCAAGCGGCAGGTCAATGATAAAAAATAAGACCATGTCGGTG
AGGAGGGTGTAA

Upstream 100 bases:

>100_bases
GAATAGTAATTATATTGAAAAGAAAAATGACAAAAATTTATTTGAAATATAAATATTCATTATGTTATTATCTTGAAGGA
AAGAAAGGAGGAAATTGATA

Downstream 100 bases:

>100_bases
TATGGAAGAGAAACGGTATGTTTTGGATTTACGGGGGGAACCCTGTCCTTATCCGGTGGTGTATTCCCTGCAGGTTCTGG
CAGAACTGGAAAGCGGAGCG

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MGEIIKSYYQKVIAEFWDQKTAVVLLGILSGLYFGTVGVVWAVTGEFTRWGASFLKLIGVDLSPYTYLKIIKYKGTVLTR
IDGVMVLGMFAGALIAALFGQNFKLRIPTAKRVLQALIGGIIAGFGTRLAMGCNLAALFTGIPQFSLHTWFFTLGTIFGT
YIGIKITLSPYFRGEPKLVKASEFNAGNLKANTQIQPFLGWLGLIVFAGILLSRPEMPNNLKLATVFGFAFGFLIQKGQV
CFTSAFRDLWLVGRTTTLKALVWGMAVQMLLTAAFIAKGTPAKVLWAGPNALIGGLLFGIGIVIAGGCETGWMYRSMEGQ
VHFWFVGLGNVIGATILFLVWDKGVYKYLAEPFPKFSLIEHFGYLPAFILTGLFLLGLYLWADLREASGRSMIKNKTMSV
RRV

Sequences:

>Translated_403_residues
MGEIIKSYYQKVIAEFWDQKTAVVLLGILSGLYFGTVGVVWAVTGEFTRWGASFLKLIGVDLSPYTYLKIIKYKGTVLTR
IDGVMVLGMFAGALIAALFGQNFKLRIPTAKRVLQALIGGIIAGFGTRLAMGCNLAALFTGIPQFSLHTWFFTLGTIFGT
YIGIKITLSPYFRGEPKLVKASEFNAGNLKANTQIQPFLGWLGLIVFAGILLSRPEMPNNLKLATVFGFAFGFLIQKGQV
CFTSAFRDLWLVGRTTTLKALVWGMAVQMLLTAAFIAKGTPAKVLWAGPNALIGGLLFGIGIVIAGGCETGWMYRSMEGQ
VHFWFVGLGNVIGATILFLVWDKGVYKYLAEPFPKFSLIEHFGYLPAFILTGLFLLGLYLWADLREASGRSMIKNKTMSV
RRV
>Mature_402_residues
GEIIKSYYQKVIAEFWDQKTAVVLLGILSGLYFGTVGVVWAVTGEFTRWGASFLKLIGVDLSPYTYLKIIKYKGTVLTRI
DGVMVLGMFAGALIAALFGQNFKLRIPTAKRVLQALIGGIIAGFGTRLAMGCNLAALFTGIPQFSLHTWFFTLGTIFGTY
IGIKITLSPYFRGEPKLVKASEFNAGNLKANTQIQPFLGWLGLIVFAGILLSRPEMPNNLKLATVFGFAFGFLIQKGQVC
FTSAFRDLWLVGRTTTLKALVWGMAVQMLLTAAFIAKGTPAKVLWAGPNALIGGLLFGIGIVIAGGCETGWMYRSMEGQV
HFWFVGLGNVIGATILFLVWDKGVYKYLAEPFPKFSLIEHFGYLPAFILTGLFLLGLYLWADLREASGRSMIKNKTMSVR
RV

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=375, Percent_Identity=51.4666666666667, Blast_Score=337, Evalue=1e-93,
Organism=Escherichia coli, GI1788323, Length=179, Percent_Identity=29.0502793296089, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44250; Mature: 44119

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIIKSYYQKVIAEFWDQKTAVVLLGILSGLYFGTVGVVWAVTGEFTRWGASFLKLIGV
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
DLSPYTYLKIIKYKGTVLTRIDGVMVLGMFAGALIAALFGQNFKLRIPTAKRVLQALIGG
CCCCHHEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH
IIAGFGTRLAMGCNLAALFTGIPQFSLHTWFFTLGTIFGTYIGIKITLSPYFRGEPKLVK
HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEE
ASEFNAGNLKANTQIQPFLGWLGLIVFAGILLSRPEMPNNLKLATVFGFAFGFLIQKGQV
ECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCH
CFTSAFRDLWLVGRTTTLKALVWGMAVQMLLTAAFIAKGTPAKVLWAGPNALIGGLLFGI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
GIVIAGGCETGWMYRSMEGQVHFWFVGLGNVIGATILFLVWDKGVYKYLAEPFPKFSLIE
HHHEECCCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
HFGYLPAFILTGLFLLGLYLWADLREASGRSMIKNKTMSVRRV
HHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCC
>Mature Secondary Structure 
GEIIKSYYQKVIAEFWDQKTAVVLLGILSGLYFGTVGVVWAVTGEFTRWGASFLKLIGV
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
DLSPYTYLKIIKYKGTVLTRIDGVMVLGMFAGALIAALFGQNFKLRIPTAKRVLQALIGG
CCCCHHEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH
IIAGFGTRLAMGCNLAALFTGIPQFSLHTWFFTLGTIFGTYIGIKITLSPYFRGEPKLVK
HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEE
ASEFNAGNLKANTQIQPFLGWLGLIVFAGILLSRPEMPNNLKLATVFGFAFGFLIQKGQV
ECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCH
CFTSAFRDLWLVGRTTTLKALVWGMAVQMLLTAAFIAKGTPAKVLWAGPNALIGGLLFGI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
GIVIAGGCETGWMYRSMEGQVHFWFVGLGNVIGATILFLVWDKGVYKYLAEPFPKFSLIE
HHHEECCCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
HFGYLPAFILTGLFLLGLYLWADLREASGRSMIKNKTMSVRRV
HHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]