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The map label for this gene is cotSA [H]

Identifier: 78044606

GI number: 78044606

Start: 580936

End: 582126

Strand: Direct

Name: cotSA [H]

Synonym: CHY_0668

Alternate gene names: 78044606

Gene position: 580936-582126 (Clockwise)

Preceding gene: 78042901

Following gene: 78044038

Centisome position: 24.19

GC content: 43.32

Gene sequence:

>1191_bases
ATGGGAGGTGATAGTATTTATACAATTGCCAAGCTCCACTGGGCTTTTCCGCCAATTATCGGTGGGGTTGAGACGCACCT
GACGCTTTTGTGCCCGGAATTAATCAGGCGCGGCTATAATTTACACCTTTTAACCGGTGCGGTTAATGGTGAACCCGAAG
AGTTCGATTTCCACGGTATGCGGGTTCGAAGGCATAGATTTTTAGATTTAAACTCTCTTTCACCGCAAATTATTAAAGAA
AACCGCAGGCAAATAAAGGATCTCCTTCACTCCTTTCTCGATGAAGTCAATCCCGAAATAATCCATCTCCATAATATGCA
TTATTTTAGCCCGGACCATTTGGAGTTTTTGGTGGAGTATAAAAACCACCGGAAAAAGCCTTTGGTTTTAACCGCCCATA
ATGTCTGGGAAGATGAACTTTGGCAGGAAATGCTTACTTTTAAAGACGAGTGGGATTACGTCATAGCGGTCAGCGATTTT
ATTAAAAAAGAGCTTATCCGCTTTGGTTTTGATGGTGAGAAAATTATCACCGTTCACCACGGAATTGATACCGAAAAATT
TAAACCGGGTATATCGCCGGATAATCCTTATGCTAAGATGGAGTTTTTTGCCGGGAAAAAAGTTATCTTTCATCCGGCCC
GGATGAGTTTTGCCAAGGGTTCCGATTATGCGGTGAAAGCCTTTGCCGAAGTGCAAAAACTATTTCCCGATACCGTCCTG
GTGATGGCGGGTACCAAGAAAACGGTGGACTGGGGTGGAGTCCAGCAAAAAGAAGTACAGGAAATTATGAAGCTTGTGGA
AGAATATGGTCTTTCTGATAAAGTTTACGTCCAATTTTTCAACTGGCAGGAAATTCACTGGATGTACGAAATTGCCGACA
TCTGCATTTATCCCAGCTCCTTTGAGGAACCCTTTGGTTTGGTAATGCTTGAAGCGATGGCTTCCGGGAAACCCATTATT
GTTACCAATTCCGGGGGTATGCCGGAAGTTGTTCAGGACGGAGTAAACGGTTTTGTTATTCCCAAAAAAGATGCCAGTGC
CCTTGCCCGAAAACTAATCTTACTTTTAGAGGACGACGAATTACGCCGGAGGATGGGTGAAAGCGGCCGGAAACTTGCTG
AAGAGAAGTTTACGGTTAAAGTTATGACCGATAATACCGAAAAAGTTTACCAGAAGCTGTTAAAACATTAA

Upstream 100 bases:

>100_bases
TCTTTTTTCCTGCAAATTATCCCCTCATAAATTCTGCCACTTCAACATAAACTTTTAAGGAAGCGGTTTTCTTTAATTAG
CCAGAAATAACCAATAAAAA

Downstream 100 bases:

>100_bases
GGGATACGGGAGTGGTGTGGATGGCGCTTGATCGGCAGTTAGACGAAGACCGGTTTCGAATTGCTCCCAAGGAATTTCAA
CCCCGGGTGGAAGTTTTAAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MGGDSIYTIAKLHWAFPPIIGGVETHLTLLCPELIRRGYNLHLLTGAVNGEPEEFDFHGMRVRRHRFLDLNSLSPQIIKE
NRRQIKDLLHSFLDEVNPEIIHLHNMHYFSPDHLEFLVEYKNHRKKPLVLTAHNVWEDELWQEMLTFKDEWDYVIAVSDF
IKKELIRFGFDGEKIITVHHGIDTEKFKPGISPDNPYAKMEFFAGKKVIFHPARMSFAKGSDYAVKAFAEVQKLFPDTVL
VMAGTKKTVDWGGVQQKEVQEIMKLVEEYGLSDKVYVQFFNWQEIHWMYEIADICIYPSSFEEPFGLVMLEAMASGKPII
VTNSGGMPEVVQDGVNGFVIPKKDASALARKLILLLEDDELRRRMGESGRKLAEEKFTVKVMTDNTEKVYQKLLKH

Sequences:

>Translated_396_residues
MGGDSIYTIAKLHWAFPPIIGGVETHLTLLCPELIRRGYNLHLLTGAVNGEPEEFDFHGMRVRRHRFLDLNSLSPQIIKE
NRRQIKDLLHSFLDEVNPEIIHLHNMHYFSPDHLEFLVEYKNHRKKPLVLTAHNVWEDELWQEMLTFKDEWDYVIAVSDF
IKKELIRFGFDGEKIITVHHGIDTEKFKPGISPDNPYAKMEFFAGKKVIFHPARMSFAKGSDYAVKAFAEVQKLFPDTVL
VMAGTKKTVDWGGVQQKEVQEIMKLVEEYGLSDKVYVQFFNWQEIHWMYEIADICIYPSSFEEPFGLVMLEAMASGKPII
VTNSGGMPEVVQDGVNGFVIPKKDASALARKLILLLEDDELRRRMGESGRKLAEEKFTVKVMTDNTEKVYQKLLKH
>Mature_395_residues
GGDSIYTIAKLHWAFPPIIGGVETHLTLLCPELIRRGYNLHLLTGAVNGEPEEFDFHGMRVRRHRFLDLNSLSPQIIKEN
RRQIKDLLHSFLDEVNPEIIHLHNMHYFSPDHLEFLVEYKNHRKKPLVLTAHNVWEDELWQEMLTFKDEWDYVIAVSDFI
KKELIRFGFDGEKIITVHHGIDTEKFKPGISPDNPYAKMEFFAGKKVIFHPARMSFAKGSDYAVKAFAEVQKLFPDTVLV
MAGTKKTVDWGGVQQKEVQEIMKLVEEYGLSDKVYVQFFNWQEIHWMYEIADICIYPSSFEEPFGLVMLEAMASGKPIIV
TNSGGMPEVVQDGVNGFVIPKKDASALARKLILLLEDDELRRRMGESGRKLAEEKFTVKVMTDNTEKVYQKLLKH

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32564184, Length=92, Percent_Identity=36.9565217391304, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21357469, Length=160, Percent_Identity=29.375, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 45753; Mature: 45622

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGDSIYTIAKLHWAFPPIIGGVETHLTLLCPELIRRGYNLHLLTGAVNGEPEEFDFHGM
CCCCCEEEEEHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCE
RVRRHRFLDLNSLSPQIIKENRRQIKDLLHSFLDEVNPEIIHLHNMHYFSPDHLEFLVEY
EEHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
KNHRKKPLVLTAHNVWEDELWQEMLTFKDEWDYVIAVSDFIKKELIRFGFDGEKIITVHH
HCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEC
GIDTEKFKPGISPDNPYAKMEFFAGKKVIFHPARMSFAKGSDYAVKAFAEVQKLFPDTVL
CCCHHHCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCCCCCHHHHHHHHHHHHCCCEEE
VMAGTKKTVDWGGVQQKEVQEIMKLVEEYGLSDKVYVQFFNWQEIHWMYEIADICIYPSS
EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHEEHHHHEECCCC
FEEPFGLVMLEAMASGKPIIVTNSGGMPEVVQDGVNGFVIPKKDASALARKLILLLEDDE
CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHEEEECCHH
LRRRMGESGRKLAEEKFTVKVMTDNTEKVYQKLLKH
HHHHHCHHHHHHHCCCEEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
GGDSIYTIAKLHWAFPPIIGGVETHLTLLCPELIRRGYNLHLLTGAVNGEPEEFDFHGM
CCCCEEEEEHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCE
RVRRHRFLDLNSLSPQIIKENRRQIKDLLHSFLDEVNPEIIHLHNMHYFSPDHLEFLVEY
EEHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
KNHRKKPLVLTAHNVWEDELWQEMLTFKDEWDYVIAVSDFIKKELIRFGFDGEKIITVHH
HCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEC
GIDTEKFKPGISPDNPYAKMEFFAGKKVIFHPARMSFAKGSDYAVKAFAEVQKLFPDTVL
CCCHHHCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCCCCCHHHHHHHHHHHHCCCEEE
VMAGTKKTVDWGGVQQKEVQEIMKLVEEYGLSDKVYVQFFNWQEIHWMYEIADICIYPSS
EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHEEHHHHEECCCC
FEEPFGLVMLEAMASGKPIIVTNSGGMPEVVQDGVNGFVIPKKDASALARKLILLLEDDE
CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHEEEECCHH
LRRRMGESGRKLAEEKFTVKVMTDNTEKVYQKLLKH
HHHHHCHHHHHHHCCCEEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377; 10234840 [H]