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The map label for this gene is hdrB [H]

Identifier: 78044470

GI number: 78044470

Start: 819645

End: 820508

Strand: Direct

Name: hdrB [H]

Synonym: CHY_0929

Alternate gene names: 78044470

Gene position: 819645-820508 (Clockwise)

Preceding gene: 78043334

Following gene: 78044755

Centisome position: 34.13

GC content: 48.84

Gene sequence:

>864_bases
ATGAAATACGCATACTATCCCGGTTGTTCCCTCCACTCAACCGCTAAGGAATACGACAAGTCCACCAAAAAGGTGGCTCA
GGCTTTAAACATTGAGCTGGTAGAGATTCCCGATTGGAACTGCTGCGGGGCTACTGCCGGGCACAGCACCAGTCACTTAC
TGGCGGTAGCTTTAGGGGCGCGGAATCTTGCTCAGGCGGAAACCTTGGGTCTGGATATTGCTGCACCCTGCGCTGCCTGT
TACCAGCGGTTGGTGGTGGCCGAAAGAGAAATGAAAGAAAACCCGGAAATCCGGGAAAAAATCAATGGTACTTTAGCGCG
GCCGTATGAAGGAAATACCCATACCTACTCTCTGGTGGAAGTTATCGCCAAGGCAAAGGACCAAATAGAAAATTTGAAAG
TTAGGTCTTTTACCGGACTAAAGGTTGCAGCTTATTACGGCTGTCTATTGGTCAAGCCACCTCAAATTATGCAGTTTGAC
GACCCGGAAAACCCTCAGATTTTAGATGATTTGGTTAAAGCGACCGGTGCGGAAACGGTTGACTGGTCTTTTAAGACCGA
ATGCTGCGGTGGAGCGCTGGCGGTTTCCAATACCGAAATTGTCTTAAAACTTACCCGTGATATCCTGCGGGTGGCTAAAG
ACCGCGGAGCGGATGTTATCGTTACCGCCTGTCCCCTTTGTCAGTCCAACCTTGACACCCGTCAGGGGCAGATTAAAGAA
GTTTACGGGGACGACTTCAACCTGCCCATATTGTACTTTACCGAATTAATTGGTTTAGCTCTCGGTTTAAAACCGGAGGA
GCTTGGCTTAAATACCCACTTTGTTAGCACCAAAAAAGTACTGGAGTGGAGAGATGCACGATGA

Upstream 100 bases:

>100_bases
CGCCTGCTGGGAATGGGCACTCTCTGAAAGGGCGGACTACAAATAGCCCAGCCTCAAACTGTACAGTTTTGTACAGTTTG
GGATACCAGGGCGGCAATTA

Downstream 100 bases:

>100_bases
AGAGAATAGGAGTATTTGTCTGCTGGTGCGGTTCTAATATCGGTGGGGTTGTGGATGTCCCGAGAGTAGCTGAGGCGGCA
AAGGAAATGCCCAATGTGGT

Product: putative succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKYAYYPGCSLHSTAKEYDKSTKKVAQALNIELVEIPDWNCCGATAGHSTSHLLAVALGARNLAQAETLGLDIAAPCAAC
YQRLVVAEREMKENPEIREKINGTLARPYEGNTHTYSLVEVIAKAKDQIENLKVRSFTGLKVAAYYGCLLVKPPQIMQFD
DPENPQILDDLVKATGAETVDWSFKTECCGGALAVSNTEIVLKLTRDILRVAKDRGADVIVTACPLCQSNLDTRQGQIKE
VYGDDFNLPILYFTELIGLALGLKPEELGLNTHFVSTKKVLEWRDAR

Sequences:

>Translated_287_residues
MKYAYYPGCSLHSTAKEYDKSTKKVAQALNIELVEIPDWNCCGATAGHSTSHLLAVALGARNLAQAETLGLDIAAPCAAC
YQRLVVAEREMKENPEIREKINGTLARPYEGNTHTYSLVEVIAKAKDQIENLKVRSFTGLKVAAYYGCLLVKPPQIMQFD
DPENPQILDDLVKATGAETVDWSFKTECCGGALAVSNTEIVLKLTRDILRVAKDRGADVIVTACPLCQSNLDTRQGQIKE
VYGDDFNLPILYFTELIGLALGLKPEELGLNTHFVSTKKVLEWRDAR
>Mature_287_residues
MKYAYYPGCSLHSTAKEYDKSTKKVAQALNIELVEIPDWNCCGATAGHSTSHLLAVALGARNLAQAETLGLDIAAPCAAC
YQRLVVAEREMKENPEIREKINGTLARPYEGNTHTYSLVEVIAKAKDQIENLKVRSFTGLKVAAYYGCLLVKPPQIMQFD
DPENPQILDDLVKATGAETVDWSFKTECCGGALAVSNTEIVLKLTRDILRVAKDRGADVIVTACPLCQSNLDTRQGQIKE
VYGDDFNLPILYFTELIGLALGLKPEELGLNTHFVSTKKVLEWRDAR

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31625; Mature: 31625

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAYYPGCSLHSTAKEYDKSTKKVAQALNIELVEIPDWNCCGATAGHSTSHLLAVALGA
CCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHCC
RNLAQAETLGLDIAAPCAACYQRLVVAEREMKENPEIREKINGTLARPYEGNTHTYSLVE
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHH
VIAKAKDQIENLKVRSFTGLKVAAYYGCLLVKPPQIMQFDDPENPQILDDLVKATGAETV
HHHHHHHHHHCCEEECCCCEEEHHHHCEEEECCCCCEECCCCCCCHHHHHHHHHCCCCEE
DWSFKTECCGGALAVSNTEIVLKLTRDILRVAKDRGADVIVTACPLCQSNLDTRQGQIKE
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCHHHH
VYGDDFNLPILYFTELIGLALGLKPEELGLNTHFVSTKKVLEWRDAR
HCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHHHHCCCC
>Mature Secondary Structure
MKYAYYPGCSLHSTAKEYDKSTKKVAQALNIELVEIPDWNCCGATAGHSTSHLLAVALGA
CCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHCC
RNLAQAETLGLDIAAPCAACYQRLVVAEREMKENPEIREKINGTLARPYEGNTHTYSLVE
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHH
VIAKAKDQIENLKVRSFTGLKVAAYYGCLLVKPPQIMQFDDPENPQILDDLVKATGAETV
HHHHHHHHHHCCEEECCCCEEEHHHHCEEEECCCCCEECCCCCCCHHHHHHHHHCCCCEE
DWSFKTECCGGALAVSNTEIVLKLTRDILRVAKDRGADVIVTACPLCQSNLDTRQGQIKE
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCHHHH
VYGDDFNLPILYFTELIGLALGLKPEELGLNTHFVSTKKVLEWRDAR
HCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]