| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044415
Identifier: 78044415
GI number: 78044415
Start: 766579
End: 767646
Strand: Direct
Name: 78044415
Synonym: CHY_0864
Alternate gene names: NA
Gene position: 766579-767646 (Clockwise)
Preceding gene: 78042920
Following gene: 78045017
Centisome position: 31.92
GC content: 42.23
Gene sequence:
>1068_bases TTGTATTTAAAAGTTTTTGATTTTAGCGGTAAAAAGCTTAAAGTTTTGCCCTGGGGTTATTTTGCCGATGGACAGATTAA GCAGGGGGTAATTACCGTTAATAACGGAATTATCTCTTCAATTGAAAAAACGGGGGAGGCGGATTTAAAAGTACCGTATT ATTTATATCCGGTGTTAGCCGATGCTCACCTCCACTTGAACTTAATGGATAACAGTGAGCTTACACTCCCGGAAATTATG GCAAAGCTAACCGGTCACGGCATTATGGGTTTTAGGGAATGCGGGGATAGGAGTGAATTCTGGAAAACCGCCAGAGAACA CTGCTCGTATGTAAAAGGTGTATTTTGCGGAAATGGTCTTTACAAAGAAGGTTATTACGGCCGAATTGCCGGAATTGCCG TAAAGGATACCAGGGAGGCTCTTTATGAAATTTCGCGTCTTTACGAAGAAGGGGCGAAGTTTGTAAAAGTATTTGTTACC GGATTGGTGAGTTTAAAGGAAAAGGGTAAAGTAGGGGCTACGGGATTTAGTCTTGAAGAATTAAAAAAAATTGTCGATAC AGCCCATAAGCTGGGGCTAATGGTTGCTGCCCATGCCAATGGCCCCGAAGGAATAGAAATAAGTATTGAAGCCGGGGTCG ATACCTTGGAGCATGGCTATTACATAACTGATGAGCTTCTTTTAAAAATGCGGGATGCCGGTACCTGGTGGGTTCCAACG GTGGCAGCAATTCGAAACCAGATGTACCGGGAAGAATTGAGTCCTGCGGAAAGAGAAAATGCTTATTATGTATATAAAGA GCAGCTTTTTAAAGTAAAGAGAGCCTTTGAACTGGGGGTAAAGCTCGGACTTGGTACCGATAGCGGTACGTCGTTTTTGG CTTTTGGTGAAGCTCTCTGGGAAGAGATGGAGCTTTATCTTAAAGCAGGTATTCCTCCCGGAGAAGTAATAAAAATTGCG GTAGAAAATAACTTTCAAATGATGGGGATATCAGGTTTTTCTGGTATAAGGCCTGGAAATTTTGCTAAATTTCTGGGGCT TAAAATTCCCTTTGGCGATGAGGTATAA
Upstream 100 bases:
>100_bases TTTAAGCTATCCGGAGACACATGATAAACGCCTCCATTTTTTAAGTAAGTCATTATCAATTATATAAAAAATTTATTTTC TTAAAAAGGGGAGATGGGGG
Downstream 100 bases:
>100_bases TAAAAGTTGAAAATTTAAACATTAGGAAGGAGAGTATATTATGTTCGGTAATTTTGGGTTTCAGGAATTGGTGGTTGTTT TAATTATTGCCCTTATTATT
Product: amidohydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MYLKVFDFSGKKLKVLPWGYFADGQIKQGVITVNNGIISSIEKTGEADLKVPYYLYPVLADAHLHLNLMDNSELTLPEIM AKLTGHGIMGFRECGDRSEFWKTAREHCSYVKGVFCGNGLYKEGYYGRIAGIAVKDTREALYEISRLYEEGAKFVKVFVT GLVSLKEKGKVGATGFSLEELKKIVDTAHKLGLMVAAHANGPEGIEISIEAGVDTLEHGYYITDELLLKMRDAGTWWVPT VAAIRNQMYREELSPAERENAYYVYKEQLFKVKRAFELGVKLGLGTDSGTSFLAFGEALWEEMELYLKAGIPPGEVIKIA VENNFQMMGISGFSGIRPGNFAKFLGLKIPFGDEV
Sequences:
>Translated_355_residues MYLKVFDFSGKKLKVLPWGYFADGQIKQGVITVNNGIISSIEKTGEADLKVPYYLYPVLADAHLHLNLMDNSELTLPEIM AKLTGHGIMGFRECGDRSEFWKTAREHCSYVKGVFCGNGLYKEGYYGRIAGIAVKDTREALYEISRLYEEGAKFVKVFVT GLVSLKEKGKVGATGFSLEELKKIVDTAHKLGLMVAAHANGPEGIEISIEAGVDTLEHGYYITDELLLKMRDAGTWWVPT VAAIRNQMYREELSPAERENAYYVYKEQLFKVKRAFELGVKLGLGTDSGTSFLAFGEALWEEMELYLKAGIPPGEVIKIA VENNFQMMGISGFSGIRPGNFAKFLGLKIPFGDEV >Mature_355_residues MYLKVFDFSGKKLKVLPWGYFADGQIKQGVITVNNGIISSIEKTGEADLKVPYYLYPVLADAHLHLNLMDNSELTLPEIM AKLTGHGIMGFRECGDRSEFWKTAREHCSYVKGVFCGNGLYKEGYYGRIAGIAVKDTREALYEISRLYEEGAKFVKVFVT GLVSLKEKGKVGATGFSLEELKKIVDTAHKLGLMVAAHANGPEGIEISIEAGVDTLEHGYYITDELLLKMRDAGTWWVPT VAAIRNQMYREELSPAERENAYYVYKEQLFKVKRAFELGVKLGLGTDSGTSFLAFGEALWEEMELYLKAGIPPGEVIKIA VENNFQMMGISGFSGIRPGNFAKFLGLKIPFGDEV
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 39495; Mature: 39495
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLKVFDFSGKKLKVLPWGYFADGQIKQGVITVNNGIISSIEKTGEADLKVPYYLYPVLA CEEEEEECCCCEEEEEECCEECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEEEE DAHLHLNLMDNSELTLPEIMAKLTGHGIMGFRECGDRSEFWKTAREHCSYVKGVFCGNGL CCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC YKEGYYGRIAGIAVKDTREALYEISRLYEEGAKFVKVFVTGLVSLKEKGKVGATGFSLEE CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LKKIVDTAHKLGLMVAAHANGPEGIEISIEAGVDTLEHGYYITDELLLKMRDAGTWWVPT HHHHHHHHHHHCEEEEEECCCCCCEEEEEECCCCHHHCCEEEHHHHHHHHHCCCCEEHHH VAAIRNQMYREELSPAERENAYYVYKEQLFKVKRAFELGVKLGLGTDSGTSFLAFGEALW HHHHHHHHHHHHCCCCHHCCCEEEHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHH EEMELYLKAGIPPGEVIKIAVENNFQMMGISGFSGIRPGNFAKFLGLKIPFGDEV HHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHEEECCCCCCC >Mature Secondary Structure MYLKVFDFSGKKLKVLPWGYFADGQIKQGVITVNNGIISSIEKTGEADLKVPYYLYPVLA CEEEEEECCCCEEEEEECCEECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEEEE DAHLHLNLMDNSELTLPEIMAKLTGHGIMGFRECGDRSEFWKTAREHCSYVKGVFCGNGL CCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC YKEGYYGRIAGIAVKDTREALYEISRLYEEGAKFVKVFVTGLVSLKEKGKVGATGFSLEE CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LKKIVDTAHKLGLMVAAHANGPEGIEISIEAGVDTLEHGYYITDELLLKMRDAGTWWVPT HHHHHHHHHHHCEEEEEECCCCCCEEEEEECCCCHHHCCEEEHHHHHHHHHCCCCEEHHH VAAIRNQMYREELSPAERENAYYVYKEQLFKVKRAFELGVKLGLGTDSGTSFLAFGEALW HHHHHHHHHHHHCCCCHHCCCEEEHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHH EEMELYLKAGIPPGEVIKIAVENNFQMMGISGFSGIRPGNFAKFLGLKIPFGDEV HHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]