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The map label for this gene is pilA

Identifier: 78044377

GI number: 78044377

Start: 549786

End: 550238

Strand: Direct

Name: pilA

Synonym: CHY_0635

Alternate gene names: NA

Gene position: 549786-550238 (Clockwise)

Preceding gene: 78045067

Following gene: 78043901

Centisome position: 22.89

GC content: 35.1

Gene sequence:

>453_bases
ATGGTATTTAAAAATATTTTTCCTGTAACCGAAAAAGGCTTTACTTTAATCGAGCTCATTGTGGTAATAACTATAGCCGG
TATAATTTTTTTAACGGCGGCAATTAGCTTAGATTATACTTTAGCAAAGATTACTTTGGCCAATGATGCTTATGCTTTAG
CTCAAAATTTACGTCAAACAAAAGAATTGGCCTCAGCGCAGGAAAAGGCTTTTACTTTGTACTTTTTTCAGGAGAATAAT
AGCTACTTAATCTCGGAAAATTATAAAGCTAATAAACTTTATGTTTTATCTCCTCGGTTAAAATTTATTGCTGTACCGTT
GGATCCAGTTACAATTGATTATAAAGGAAGCAGCCGGGCCTTTTCGGTGGAAATGGCTAATAGTTATGGAGTAAAGGTTC
GGGTTTATACTACTCCCAGAACCGACCGGATTTGGATTACTCCCTTTTATTAG

Upstream 100 bases:

>100_bases
TTTTGACGAAAAAAAAGGCTCGCGGTGACATGGTACCTTTTGGCCCGTTTTTAATAGGGGCAGCATTTATTACCGTTTTA
TGGGGAGAAAAAATTATAAA

Downstream 100 bases:

>100_bases
GTGGTGGGATGATGAAGGAAAAGGGATTTAGCTTAGTTGAAACAATGGTAGCAGTCCTGCTTTTATTGCTAATTTTAATT
CCGTTATTAAATCTTCTTAC

Product: type IV pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVFKNIFPVTEKGFTLIELIVVITIAGIIFLTAAISLDYTLAKITLANDAYALAQNLRQTKELASAQEKAFTLYFFQENN
SYLISENYKANKLYVLSPRLKFIAVPLDPVTIDYKGSSRAFSVEMANSYGVKVRVYTTPRTDRIWITPFY

Sequences:

>Translated_150_residues
MVFKNIFPVTEKGFTLIELIVVITIAGIIFLTAAISLDYTLAKITLANDAYALAQNLRQTKELASAQEKAFTLYFFQENN
SYLISENYKANKLYVLSPRLKFIAVPLDPVTIDYKGSSRAFSVEMANSYGVKVRVYTTPRTDRIWITPFY
>Mature_150_residues
MVFKNIFPVTEKGFTLIELIVVITIAGIIFLTAAISLDYTLAKITLANDAYALAQNLRQTKELASAQEKAFTLYFFQENN
SYLISENYKANKLYVLSPRLKFIAVPLDPVTIDYKGSSRAFSVEMANSYGVKVRVYTTPRTDRIWITPFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17041; Mature: 17041

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKNIFPVTEKGFTLIELIVVITIAGIIFLTAAISLDYTLAKITLANDAYALAQNLRQT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHH
KELASAQEKAFTLYFFQENNSYLISENYKANKLYVLSPRLKFIAVPLDPVTIDYKGSSRA
HHHHHHCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCEEEEEEECCCEEEEECCCCEE
FSVEMANSYGVKVRVYTTPRTDRIWITPFY
EEEEECCCCCEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MVFKNIFPVTEKGFTLIELIVVITIAGIIFLTAAISLDYTLAKITLANDAYALAQNLRQT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHH
KELASAQEKAFTLYFFQENNSYLISENYKANKLYVLSPRLKFIAVPLDPVTIDYKGSSRA
HHHHHHCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCEEEEEEECCCEEEEECCCCEE
FSVEMANSYGVKVRVYTTPRTDRIWITPFY
EEEEECCCCCEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA