Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78044343

Identifier: 78044343

GI number: 78044343

Start: 1254646

End: 1254879

Strand: Direct

Name: 78044343

Synonym: CHY_1399

Alternate gene names: NA

Gene position: 1254646-1254879 (Clockwise)

Preceding gene: 78044631

Following gene: 78044639

Centisome position: 52.24

GC content: 35.9

Gene sequence:

>234_bases
ATGAAGGTGGGCGACCTGCAGGAAGAGTATATTACTTTGGCCTTAAGCGAAGGTATTCAAAATTTAGAACAAACCTGTCG
GATTTATCAAACCATAATTTCAAAGCATTCCGATAAAGTAATTCGGGAAGCCGCTCTTAGAGGTTTAGAAGGAAAACAAA
AACAAATAAAAAATCTTTTAGAAATTGCCAATGCCTATAACTTTAAAGTAAAGCGGGGGATTGAATGGAACTAA

Upstream 100 bases:

>100_bases
AGCTTTTCTCTGCCATTTTTATTGCCTCCAATCTTCTTTTTCTCATAAAAAGTATAGCAAAGGAAAATCCTAAAATAAAG
GTAATCTAACAGAAAGGAGG

Downstream 100 bases:

>100_bases
AAGATCTTTTGCTAATGGCTTTAAAGGCTGAGAGGCAAAACTACCTTTTCTTGGCCGAAATGACCGTTAAAATTAAACAC
CCCGAATTAAGAAGTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKVGDLQEEYITLALSEGIQNLEQTCRIYQTIISKHSDKVIREAALRGLEGKQKQIKNLLEIANAYNFKVKRGIEWN

Sequences:

>Translated_77_residues
MKVGDLQEEYITLALSEGIQNLEQTCRIYQTIISKHSDKVIREAALRGLEGKQKQIKNLLEIANAYNFKVKRGIEWN
>Mature_77_residues
MKVGDLQEEYITLALSEGIQNLEQTCRIYQTIISKHSDKVIREAALRGLEGKQKQIKNLLEIANAYNFKVKRGIEWN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8891; Mature: 8891

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGDLQEEYITLALSEGIQNLEQTCRIYQTIISKHSDKVIREAALRGLEGKQKQIKNLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
EIANAYNFKVKRGIEWN
HHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MKVGDLQEEYITLALSEGIQNLEQTCRIYQTIISKHSDKVIREAALRGLEGKQKQIKNLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
EIANAYNFKVKRGIEWN
HHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA