| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044322
Identifier: 78044322
GI number: 78044322
Start: 329910
End: 331145
Strand: Direct
Name: 78044322
Synonym: CHY_0384
Alternate gene names: NA
Gene position: 329910-331145 (Clockwise)
Preceding gene: 78042736
Following gene: 78043910
Centisome position: 13.74
GC content: 37.7
Gene sequence:
>1236_bases ATGTCCATTAACGAAATGTACTTTTCGGAGCTCTTAGGGAATCCTGCCATTGATCCTACCGGAGAGAAATTAGGTGTACT TTATGATATTGGAGTAAAGGGGAGTGACACTTTTCCCGAAATTTGCTTTGTTGCCGTTAAGAGGGGTAAAAAAATATATA GTGTAGAATATAGCTTTGTAAAAATTTTAAACCGCCGCATTCTTGCTTTTAACCGTCGGTTAAAAAATATCCCTTTAAAT GAGTTAAATTTGGAATGTCTTTGGTTAAGACAACATATTTTAGACAAACAAATTGTCGATATTTTGGGAAGTAAAGTAGT AAGGGTAAATGATATTAAACTTGCCTATTATGAGGGAACGGTCCGGCCGGTGGCGGTAGATATTGGGCTTCTGGGGCTTT TACGCCGCCTGGGAGTAGGCTTTGTGGGCAATAAATTTAATTTAAAGGAAGAGTTAATCTCCTGGGAGTACCTGGAGCCA ATTTATCAAGGAACGCCAGAAATTTTGCTGACGGTACCCCAGAGTAAAATTGCAGATTTGCACCCTTCGGATATAGCTGA AATTTTATCCCAATTGAACAGTAAAGAAAGAACGAAGCTAATTAATTCTTTAGACGATGAGACTTTAGCTGAAGCTTTAG GTGAAATGGAAGCTAACTTTACTGCTAATATCTTGGAAAATCTTGATGATAAACGAGCATCGGAAATTTTAGAGCAAATG GCCAGTGACGATGTAGCCGATTTTTTAGGAGATTTGCCGGAATTTAAAAGGCAGCGTTTCTTTGCTCTTTTAAGCCAACA TGATCAAGAAAAGATTAAGAAACTCTTAGAATACGATGAAAAAACTGCCGGTGGCCTTATGACCAAAGAATTTATTACTT TTAATGAAGAATTAACCGCCGAAGAAACTATTAATAAATTAAGAGAAATGGCGCCGGATGCGGAAATGATTTATTACCTT TATGTGTTAAATGAAAAAGGACAGTTAAATGGGGTTTTATCCCTGCGGGATTTAATTGTAGCCAAGCCTTCGGAGAAATT AAAAAATATCATGCGGAAAAAGATTATTTCGGTAGCGGATAGGGCAAGCGCCAAAGAAGTTATTTCGGTAATTGCTAAAT ACAACCTCTTAGCTTTACCGGTTGTGGATAAAGATAATCGGCCTATCGGCATAATAACAGTGGATGATGTGATGGACTTA CTCTTGCCCGGAGGTTATCACCATGAAAAAGTTTAA
Upstream 100 bases:
>100_bases GTTGAGCTAAAGCTTTGACGAGTGGAGAAGGTTTTTACAACCTTCTTTTTGGCGGCGGCCAGGAAGGTTTTTTTATTTTT TAAAATAGGTGGTGAAGCGT
Downstream 100 bases:
>100_bases AGTAACTAATAAGTTTTTGCAAAAAAGTTTATATGTTTTAAGTATAATTGGCCCGGGGCTTATTACGGTAAATGCGGGAA ATGATGCCGGAGGTATCGCT
Product: MgtE intracellular domain-contain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSINEMYFSELLGNPAIDPTGEKLGVLYDIGVKGSDTFPEICFVAVKRGKKIYSVEYSFVKILNRRILAFNRRLKNIPLN ELNLECLWLRQHILDKQIVDILGSKVVRVNDIKLAYYEGTVRPVAVDIGLLGLLRRLGVGFVGNKFNLKEELISWEYLEP IYQGTPEILLTVPQSKIADLHPSDIAEILSQLNSKERTKLINSLDDETLAEALGEMEANFTANILENLDDKRASEILEQM ASDDVADFLGDLPEFKRQRFFALLSQHDQEKIKKLLEYDEKTAGGLMTKEFITFNEELTAEETINKLREMAPDAEMIYYL YVLNEKGQLNGVLSLRDLIVAKPSEKLKNIMRKKIISVADRASAKEVISVIAKYNLLALPVVDKDNRPIGIITVDDVMDL LLPGGYHHEKV
Sequences:
>Translated_411_residues MSINEMYFSELLGNPAIDPTGEKLGVLYDIGVKGSDTFPEICFVAVKRGKKIYSVEYSFVKILNRRILAFNRRLKNIPLN ELNLECLWLRQHILDKQIVDILGSKVVRVNDIKLAYYEGTVRPVAVDIGLLGLLRRLGVGFVGNKFNLKEELISWEYLEP IYQGTPEILLTVPQSKIADLHPSDIAEILSQLNSKERTKLINSLDDETLAEALGEMEANFTANILENLDDKRASEILEQM ASDDVADFLGDLPEFKRQRFFALLSQHDQEKIKKLLEYDEKTAGGLMTKEFITFNEELTAEETINKLREMAPDAEMIYYL YVLNEKGQLNGVLSLRDLIVAKPSEKLKNIMRKKIISVADRASAKEVISVIAKYNLLALPVVDKDNRPIGIITVDDVMDL LLPGGYHHEKV >Mature_410_residues SINEMYFSELLGNPAIDPTGEKLGVLYDIGVKGSDTFPEICFVAVKRGKKIYSVEYSFVKILNRRILAFNRRLKNIPLNE LNLECLWLRQHILDKQIVDILGSKVVRVNDIKLAYYEGTVRPVAVDIGLLGLLRRLGVGFVGNKFNLKEELISWEYLEPI YQGTPEILLTVPQSKIADLHPSDIAEILSQLNSKERTKLINSLDDETLAEALGEMEANFTANILENLDDKRASEILEQMA SDDVADFLGDLPEFKRQRFFALLSQHDQEKIKKLLEYDEKTAGGLMTKEFITFNEELTAEETINKLREMAPDAEMIYYLY VLNEKGQLNGVLSLRDLIVAKPSEKLKNIMRKKIISVADRASAKEVISVIAKYNLLALPVVDKDNRPIGIITVDDVMDLL LPGGYHHEKV
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 46572; Mature: 46440
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINEMYFSELLGNPAIDPTGEKLGVLYDIGVKGSDTFPEICFVAVKRGKKIYSVEYSFV CCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEHHHHH KILNRRILAFNRRLKNIPLNELNLECLWLRQHILDKQIVDILGSKVVRVNDIKLAYYEGT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC VRPVAVDIGLLGLLRRLGVGFVGNKFNLKEELISWEYLEPIYQGTPEILLTVPQSKIADL CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCC HPSDIAEILSQLNSKERTKLINSLDDETLAEALGEMEANFTANILENLDDKRASEILEQM CHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH ASDDVADFLGDLPEFKRQRFFALLSQHDQEKIKKLLEYDEKTAGGLMTKEFITFNEELTA HCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCHHHHHHHCCHHCCH EETINKLREMAPDAEMIYYLYVLNEKGQLNGVLSLRDLIVAKPSEKLKNIMRKKIISVAD HHHHHHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RASAKEVISVIAKYNLLALPVVDKDNRPIGIITVDDVMDLLLPGGYHHEKV HCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SINEMYFSELLGNPAIDPTGEKLGVLYDIGVKGSDTFPEICFVAVKRGKKIYSVEYSFV CCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEHHHHH KILNRRILAFNRRLKNIPLNELNLECLWLRQHILDKQIVDILGSKVVRVNDIKLAYYEGT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC VRPVAVDIGLLGLLRRLGVGFVGNKFNLKEELISWEYLEPIYQGTPEILLTVPQSKIADL CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCC HPSDIAEILSQLNSKERTKLINSLDDETLAEALGEMEANFTANILENLDDKRASEILEQM CHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH ASDDVADFLGDLPEFKRQRFFALLSQHDQEKIKKLLEYDEKTAGGLMTKEFITFNEELTA HCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCHHHHHHHCCHHCCH EETINKLREMAPDAEMIYYLYVLNEKGQLNGVLSLRDLIVAKPSEKLKNIMRKKIISVAD HHHHHHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RASAKEVISVIAKYNLLALPVVDKDNRPIGIITVDDVMDLLLPGGYHHEKV HCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA