Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is prfB

Identifier: 78044242

GI number: 78044242

Start: 137034

End: 137102

Strand: Direct

Name: prfB

Synonym: CHY_0163

Alternate gene names: NA

Gene position: 137034-137102 (Clockwise)

Preceding gene: 78044472

Following gene: 78042996

Centisome position: 5.71

GC content: 40.58

Gene sequence:

>1117_bases
ATGTTAATTGAGCTGAAAAGAAGTTTGGCGGAGATTTCCCCCAAGATTGAGGAAATGAGGGTTTCTCTTTGACATTCCCG
GGAAAAAGGAACTGGTGGAAAAACTTACGGCCAAAACCTACGAGCCTGACTTCTGGGATAATTACACAGAAGCCCAGAAA
ACTCTAAAAGAATTAAACCGCCTCAAAGATGACATTGAAAAGTATGAAGAACTTTTAAAAGCGCAGGAAGAGCTTACCGT
TTTATTGCAACTTTTGGAAGAGGAAGAAAATGAGGAGTTAGCCGTTGAGGCTCAGGACAAAGCCAAAAAATTAATGGAAA
AACTCCACCGGATGGAAATAGAGCTTTTGCTATCGGGGCCATATGATAAAAATTCGGCAATAGTTTCCCTCCATGCGGGA
GCGGGAGGTACGGAGGCCCAGGACTGGGTGGAAATGCTTTACCGGATGTATACCCGCTGGGCCGAAGATAAAGGGTATAA
AGTGGAACTAATCGACCGGCTTTTAGGGGAAGAGGCGGGCTTAAAAAGCGTTACTTTTAGCGTGGAGGGGTTTGGCGCTT
ACGGTTATTTGAAAGCCGAGCGGGGAGTGCACCGCTTAATTCGGATTTCTCCCTTTGATTTTTCCGGCCGGCGACATACT
TCCTTTGCTTCGGTGGATGTCCTGCCGGAGGTAGCGGAAGATATTCCGGAAATTGAATTAAAGGAAGAAGAGTTAAAAAT
AGAAACGTTTCGGTCGGGAGGAGCCGGGGGACAGCATGTCAATAAAACCGAATCGGCGGTGCGGATTACCCACCTGCCTA
CGGGCATAACGGTGGTTTGCCAGAACGAGCGCTCCCAGTTAATGAACCGGGCGTTAGCGGAAAAACTATTAAAAGCCAAG
CTTTTGGATCTGGAAATGAAGAAAAAGGAAGAAGAAATGGCCAAACTTCGGGGGGAGCAGAAGGAGATTGCCTGGGGCAG
TCAGATAAGAACTTACGTTTTTCATCCCTATAGCCTGGTTAAAGACCACCGCACCGGCGTTGAAGTAGGGGATGTCCAGG
GGGTCATGGATGGCGAAATTGACATTTTTATCGAAGCTTATCTTAAAATGCTGGTGACACAGGGAGGAAACCAATGA

Upstream 100 bases:

>100_bases
CCGGGAGCAAAAAATTGGCCGCAATGATCCCTGTCCCTGCGGTAGCGGTAAGAAATACAAGAAGTGCTGTGGCAGAAACG
GGTAAAGGAAGTGGTTAGCT

Downstream 100 bases:

>100_bases
AGCTTAGCGACAGAGTGCGAGCGGTAATCGATTATTTCTGGATTTTTGTGGGTTCGGCACTGATTGCTTTAGCCCTGGAC
TGGTTTTTAATTCCCAATAA

Product: peptide chain release factor 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 23; Mature: 23

Protein sequence:

>371_residues
MLIELKRSLAEISPKIEEMRVSLDIPGKKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEELLKAQEELTV
LLQLLEEEENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSLHAGAGGTEAQDWVEMLYRMYTRWAEDKGYK
VELIDRLLGEEAGLKSVTFSVEGFGAYGYLKAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKI
ETFRSGGAGGQHVNKTESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLRGEQKEIAWGS
QIRTYVFHPYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAYLKMLVTQGGNQ

Sequences:

>Translated_23_residues
MLIELKRSLAEISPKIEEMRVSL
>Mature_23_residues
MLIELKRSLAEISPKIEEMRVSL

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 2686; Mature: 2686

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.7 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.7 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIELKRSLAEISPKIEEMRVSL
CCHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MLIELKRSLAEISPKIEEMRVSL
CCHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA