| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044203
Identifier: 78044203
GI number: 78044203
Start: 1675775
End: 1676692
Strand: Direct
Name: 78044203
Synonym: CHY_1869
Alternate gene names: NA
Gene position: 1675775-1676692 (Clockwise)
Preceding gene: 78044789
Following gene: 78044380
Centisome position: 69.78
GC content: 34.42
Gene sequence:
>918_bases ATGGCTGAAAATGAAAATTTTGAAAATGTTAATAATAAGATAAGTTTTGATGAAAAAGCTTTTTTACGTAAAGCTCGTTT TATAAGCATTCTTCGTATTACATTGATTTCTTTAGGAGTGGCTATTGGTATATTTGTATTGTCCTTTGTAATCCCCGAAA TAATGCTGCAGAATCAAGAAAACCGCATCGATAGTATCTATCCAGAACTTATTAAATTCAGCGAACCCAACACCTTTGTC CTTTCAGGAGAAAGCTACAATGTTAGATTGTTTGGTCGCCAAAAGAAGTATTACCTATTAAGATTGATAGGCAATAAACC TTATCCGGCCGGAGCATTAACTGTTGATTTTGATGTTTGGGGTGGAGAACAAATTAAGGGAAACCAAGCCTTTACTCTCC CAGAGGGAGAAAAAGAATATCTTGCGCCCTATGCTGTACCCAAATTAAAATTTTACCACCCAGCTGCAAATTACGAAAAA ATTAATATAGAATTTAATATCCTAAAAAATATACCCAAAGATTATTATGTGGAAATGGCCCTCTCATTCAGGAAGCCTTT AACACTTGATGAAATGAAAACCATTATGCCTGGTGATTTAAAGTTAATGTGGGGGGCTGTATGTGTTTTTTCAGAAAAAG ATTATGCGAAAAACAGTTATCTTTCCGAAAGATTGGTTGGAAATCCTTACCTTGATAAAACCAATGGAGAAAAACAATTA CTTAAAGAACTTGAATGGCTTAGTAATGTTCCGAGTCATCATGCGAAGAATCTAAAAAGAACCGTAAGCTACTTGAAAGA AAATGGTATTAAATATTATGGGGTAGTTGTAGTAGGAAATCCAGATACCCTTGCAAAATTATCTTCCAATCCAATGATAA GAGCTGCGGTTTTAGGAATAGTTACAAGACCAGAATAG
Upstream 100 bases:
>100_bases TTCATCTTTGCTTAAAATTAGTCCAGCTTCAGTTAAGACAATGCTGTGGAGACTAAGAAAAAAGGTAAAGGAATATTTAG AAAAGGAGGATGAAAATTAA
Downstream 100 bases:
>100_bases GATAATAATTAGCGCAGGAGCAACCCTTTTCCTTAAACCCTTTCTTGCCAAACGTATAAACATTGTATAAACTTAAATCA AAAATGAGGTGATCCTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAENENFENVNNKISFDEKAFLRKARFISILRITLISLGVAIGIFVLSFVIPEIMLQNQENRIDSIYPELIKFSEPNTFV LSGESYNVRLFGRQKKYYLLRLIGNKPYPAGALTVDFDVWGGEQIKGNQAFTLPEGEKEYLAPYAVPKLKFYHPAANYEK INIEFNILKNIPKDYYVEMALSFRKPLTLDEMKTIMPGDLKLMWGAVCVFSEKDYAKNSYLSERLVGNPYLDKTNGEKQL LKELEWLSNVPSHHAKNLKRTVSYLKENGIKYYGVVVVGNPDTLAKLSSNPMIRAAVLGIVTRPE
Sequences:
>Translated_305_residues MAENENFENVNNKISFDEKAFLRKARFISILRITLISLGVAIGIFVLSFVIPEIMLQNQENRIDSIYPELIKFSEPNTFV LSGESYNVRLFGRQKKYYLLRLIGNKPYPAGALTVDFDVWGGEQIKGNQAFTLPEGEKEYLAPYAVPKLKFYHPAANYEK INIEFNILKNIPKDYYVEMALSFRKPLTLDEMKTIMPGDLKLMWGAVCVFSEKDYAKNSYLSERLVGNPYLDKTNGEKQL LKELEWLSNVPSHHAKNLKRTVSYLKENGIKYYGVVVVGNPDTLAKLSSNPMIRAAVLGIVTRPE >Mature_304_residues AENENFENVNNKISFDEKAFLRKARFISILRITLISLGVAIGIFVLSFVIPEIMLQNQENRIDSIYPELIKFSEPNTFVL SGESYNVRLFGRQKKYYLLRLIGNKPYPAGALTVDFDVWGGEQIKGNQAFTLPEGEKEYLAPYAVPKLKFYHPAANYEKI NIEFNILKNIPKDYYVEMALSFRKPLTLDEMKTIMPGDLKLMWGAVCVFSEKDYAKNSYLSERLVGNPYLDKTNGEKQLL KELEWLSNVPSHHAKNLKRTVSYLKENGIKYYGVVVVGNPDTLAKLSSNPMIRAAVLGIVTRPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34837; Mature: 34706
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENENFENVNNKISFDEKAFLRKARFISILRITLISLGVAIGIFVLSFVIPEIMLQNQE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NRIDSIYPELIKFSEPNTFVLSGESYNVRLFGRQKKYYLLRLIGNKPYPAGALTVDFDVW CHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEC GGEQIKGNQAFTLPEGEKEYLAPYAVPKLKFYHPAANYEKINIEFNILKNIPKDYYVEMA CCCEECCCEEEECCCCCHHHCCCCCCCCEEEECCCCCCEEEEEEEEEHHCCCHHHHHHHH LSFRKPLTLDEMKTIMPGDLKLMWGAVCVFSEKDYAKNSYLSERLVGNPYLDKTNGEKQL HHHCCCCCHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHH LKELEWLSNVPSHHAKNLKRTVSYLKENGIKYYGVVVVGNPDTLAKLSSNPMIRAAVLGI HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHCCCCCCEEEEEEEE VTRPE EECCC >Mature Secondary Structure AENENFENVNNKISFDEKAFLRKARFISILRITLISLGVAIGIFVLSFVIPEIMLQNQE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NRIDSIYPELIKFSEPNTFVLSGESYNVRLFGRQKKYYLLRLIGNKPYPAGALTVDFDVW CHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEC GGEQIKGNQAFTLPEGEKEYLAPYAVPKLKFYHPAANYEKINIEFNILKNIPKDYYVEMA CCCEECCCEEEECCCCCHHHCCCCCCCCEEEECCCCCCEEEEEEEEEHHCCCHHHHHHHH LSFRKPLTLDEMKTIMPGDLKLMWGAVCVFSEKDYAKNSYLSERLVGNPYLDKTNGEKQL HHHCCCCCHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHH LKELEWLSNVPSHHAKNLKRTVSYLKENGIKYYGVVVVGNPDTLAKLSSNPMIRAAVLGI HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHCCCCCCEEEEEEEE VTRPE EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA