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The map label for this gene is ylbK [H]

Identifier: 78044184

GI number: 78044184

Start: 790618

End: 791556

Strand: Direct

Name: ylbK [H]

Synonym: CHY_0894

Alternate gene names: 78044184

Gene position: 790618-791556 (Clockwise)

Preceding gene: 78044878

Following gene: 78043029

Centisome position: 32.92

GC content: 41.53

Gene sequence:

>939_bases
ATGTGTAAAAAACAGAAGGTTAAAGTAAGGCCACGTATTGGAATAGCTCTGGGAAGCGGTGGTGCTAGAGGTTATGCCCA
TATAGGTGTGCTCAAGGCATTGCAGGAAGCAAATATACCAATTGATATTATAGCGGGGACCAGCATGGGGGCAGTTGTAG
GTGCAGCTTATGCTGCAGGATACCGGATCGAAGAGTTGGAGGATATAGCTCTCAAAATGCGGTGGCGCTGGATACTTAAC
CTTTTCGATCCTACTCTACCCCGCCAGGGCATAATAGCCGGAAACAAAGTAGAAAAGTACTTTGAAATATTAACCCAGGG
GAAAGAGTTTTCCCAGTTGCGGAAGCCTTTGACTGTTGTTGCTACTGATATCGTTTCTGGAGAAGAAGTTCGTATAAGTA
AAGGATTGGTGGCTAAAGCCTTACGAGCCAGCATAGCTATACCCGGGGTATTTTCTCCTGTTAAGATTGATGAACGAATT
TTAGTGGACGGTTCGGTAACAACTCCAGTACCTGTCCGGGCAGCTAAAGAAGCAGGTGCAGATATTGTAATAGCGATTGA
CGTTAGTTCAAATGTAGATCAGACTTCCACCTTGGTTCATACCTGGAAGAGGATAAAAAATATGCCTTCTCAAAAAGTGG
TCCGTTATATTAAAAATTCACGCTTCGAGATTATCAATGTTCTAGATAATACTTTGGAACTGTGTGCCCGGCCTAAAGAA
GTTTCTTTGAATTCTGGACTTCATGGTAAACATTATTATTTGCTTAAGCCAGAGGTAGGAAATATTAAGTGGTATGAGTT
CTATCGTGCTGGTGAGTGTATTCGTGCTGGGGAAATTGCAGGGAAGAAAGTGACTGAAAAAATAAAAATTGCTCTTGATA
CTGGAAATTTTATTGAAGAAGGAGTAAAGGAAAGCTTTTGGGAATTAAAAGCAATCTAA

Upstream 100 bases:

>100_bases
AAATATTTTTTTAAGTATTTTTTGTGTCTTTTGGGTACACCGGTTATTATCGGGAAAGAAAATATTCCTAAAAATATGTA
GAGGCAATGGAGGCGAAAAT

Downstream 100 bases:

>100_bases
AAAAATCTTTATGGCTTTTTAAGCAGAAGATATTGACTTTATGGAATTAAAAAAAGGGGGGTGAGTAACCAATATAAAAG
CAAGCAAATGGTTATTTTTA

Product: phospholipase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MCKKQKVKVRPRIGIALGSGGARGYAHIGVLKALQEANIPIDIIAGTSMGAVVGAAYAAGYRIEELEDIALKMRWRWILN
LFDPTLPRQGIIAGNKVEKYFEILTQGKEFSQLRKPLTVVATDIVSGEEVRISKGLVAKALRASIAIPGVFSPVKIDERI
LVDGSVTTPVPVRAAKEAGADIVIAIDVSSNVDQTSTLVHTWKRIKNMPSQKVVRYIKNSRFEIINVLDNTLELCARPKE
VSLNSGLHGKHYYLLKPEVGNIKWYEFYRAGECIRAGEIAGKKVTEKIKIALDTGNFIEEGVKESFWELKAI

Sequences:

>Translated_312_residues
MCKKQKVKVRPRIGIALGSGGARGYAHIGVLKALQEANIPIDIIAGTSMGAVVGAAYAAGYRIEELEDIALKMRWRWILN
LFDPTLPRQGIIAGNKVEKYFEILTQGKEFSQLRKPLTVVATDIVSGEEVRISKGLVAKALRASIAIPGVFSPVKIDERI
LVDGSVTTPVPVRAAKEAGADIVIAIDVSSNVDQTSTLVHTWKRIKNMPSQKVVRYIKNSRFEIINVLDNTLELCARPKE
VSLNSGLHGKHYYLLKPEVGNIKWYEFYRAGECIRAGEIAGKKVTEKIKIALDTGNFIEEGVKESFWELKAI
>Mature_312_residues
MCKKQKVKVRPRIGIALGSGGARGYAHIGVLKALQEANIPIDIIAGTSMGAVVGAAYAAGYRIEELEDIALKMRWRWILN
LFDPTLPRQGIIAGNKVEKYFEILTQGKEFSQLRKPLTVVATDIVSGEEVRISKGLVAKALRASIAIPGVFSPVKIDERI
LVDGSVTTPVPVRAAKEAGADIVIAIDVSSNVDQTSTLVHTWKRIKNMPSQKVVRYIKNSRFEIINVLDNTLELCARPKE
VSLNSGLHGKHYYLLKPEVGNIKWYEFYRAGECIRAGEIAGKKVTEKIKIALDTGNFIEEGVKESFWELKAI

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=213, Percent_Identity=34.7417840375587, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI116256487, Length=213, Percent_Identity=34.7417840375587, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI260656043, Length=213, Percent_Identity=34.7417840375587, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI260656037, Length=213, Percent_Identity=34.7417840375587, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI260656039, Length=213, Percent_Identity=34.7417840375587, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI148727335, Length=291, Percent_Identity=27.8350515463918, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI148727290, Length=291, Percent_Identity=27.8350515463918, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI226510936, Length=303, Percent_Identity=31.6831683168317, Blast_Score=141, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI71997299, Length=175, Percent_Identity=30.2857142857143, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193204778, Length=191, Percent_Identity=32.4607329842932, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71997289, Length=175, Percent_Identity=30.2857142857143, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=187, Percent_Identity=29.4117647058824, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI281376913, Length=186, Percent_Identity=37.0967741935484, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI28571388, Length=190, Percent_Identity=33.6842105263158, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 34410; Mature: 34410

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS01237 UPF0028

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKKQKVKVRPRIGIALGSGGARGYAHIGVLKALQEANIPIDIIAGTSMGAVVGAAYAAG
CCCCCCEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
YRIEELEDIALKMRWRWILNLFDPTLPRQGIIAGNKVEKYFEILTQGKEFSQLRKPLTVV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEEE
ATDIVSGEEVRISKGLVAKALRASIAIPGVFSPVKIDERILVDGSVTTPVPVRAAKEAGA
EHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCC
DIVIAIDVSSNVDQTSTLVHTWKRIKNMPSQKVVRYIKNSRFEIINVLDNTLELCARPKE
EEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
VSLNSGLHGKHYYLLKPEVGNIKWYEFYRAGECIRAGEIAGKKVTEKIKIALDTGNFIEE
CCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEECCCCCCHHHCEEEEEEEECCHHHHH
GVKESFWELKAI
HHHHHHHHHCCC
>Mature Secondary Structure
MCKKQKVKVRPRIGIALGSGGARGYAHIGVLKALQEANIPIDIIAGTSMGAVVGAAYAAG
CCCCCCEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
YRIEELEDIALKMRWRWILNLFDPTLPRQGIIAGNKVEKYFEILTQGKEFSQLRKPLTVV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEEE
ATDIVSGEEVRISKGLVAKALRASIAIPGVFSPVKIDERILVDGSVTTPVPVRAAKEAGA
EHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCC
DIVIAIDVSSNVDQTSTLVHTWKRIKNMPSQKVVRYIKNSRFEIINVLDNTLELCARPKE
EEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
VSLNSGLHGKHYYLLKPEVGNIKWYEFYRAGECIRAGEIAGKKVTEKIKIALDTGNFIEE
CCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEECCCCCCHHHCEEEEEEEECCHHHHH
GVKESFWELKAI
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]