| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044151
Identifier: 78044151
GI number: 78044151
Start: 406627
End: 407439
Strand: Direct
Name: 78044151
Synonym: CHY_0471
Alternate gene names: NA
Gene position: 406627-407439 (Clockwise)
Preceding gene: 78043615
Following gene: 78043088
Centisome position: 16.93
GC content: 38.75
Gene sequence:
>813_bases ATGGGTTTGATTTTTAAAGATGTAGGGGTTATTGACCTGGACGGAAGCGTTACGCTCCAGGAAAACCTTTTACTAAAATT CAAACCCAAAATTATCAGTTTACCCCCGGAAAGTAACTTAAAAATTGTGACAAGTCTCGAAAATTACCAGGCGGTCTGTC AAAAACTCAGCAATACCGTTTATGGCGTGAATTTTTGCGGCCTGGGGGAATTTCACCACCTTGCCTATTACTTAATTAAA AGAGTTCCGGTTCAGGAAGTAGCGGTAGTGGTTTTTGACAACCATCCAGATTTACTGCCTACTTTTCCCGGATATATTTC TTGCGGTTCCTGGCTTTTAAATGTTGCTGAGTTAAAAAAGGTTGTGCAAATAATAGTAGTAGGAGTTACAGAAATTTCGG GTTTAAAAAGCGCTCCGCCTACCTCGGTTAGAGAAAAAATTATCCTTTTTCTTCCCCAAACTCAGAAGAAGAAAATTAAA AAAGCGACAATTCCGGTAAGATACTACGATGAAAACAATCTCTTGACGGAAATCCATAAAAGCTTAAAAGTTAAGGATAT TTATATAAGTATAGACAAAGATGTCCTTCACCCTCTTGATGCGGTTACCACCTGGGAGCAGGGAGAATTAAGATTAAACC AGTTACTTTCTGCGTTAGCGATGTTGAAAGAAAAATATAAAATTTGGGGCATTGACATTTGTGGAGAATACGGAAGCGAA CTTCTTAAAATTCAGCGGATAGGGGAGAGGTGGGCTACATCGCAAAACGAAAGGGCAAACCTTGAAATATTAGAGATTTT ACTGGGAGAATAA
Upstream 100 bases:
>100_bases GCTCTTTTACGGGTATGTGACGTTCATAATGTGCCAATTGCCACCAACTGGAGCAGTGCCGAATTGTTTTTACGAGCCTT AAATTAAAAGAGGGATGGTA
Downstream 100 bases:
>100_bases AAATAAAGAACCCCTTTACAGGGGTATTTAATGGGGTAGGTTATGGCATCTGATTAATAATATACACTGAAAATGTTAAT AATACTCTGTGGTAAAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MGLIFKDVGVIDLDGSVTLQENLLLKFKPKIISLPPESNLKIVTSLENYQAVCQKLSNTVYGVNFCGLGEFHHLAYYLIK RVPVQEVAVVVFDNHPDLLPTFPGYISCGSWLLNVAELKKVVQIIVVGVTEISGLKSAPPTSVREKIILFLPQTQKKKIK KATIPVRYYDENNLLTEIHKSLKVKDIYISIDKDVLHPLDAVTTWEQGELRLNQLLSALAMLKEKYKIWGIDICGEYGSE LLKIQRIGERWATSQNERANLEILEILLGE
Sequences:
>Translated_270_residues MGLIFKDVGVIDLDGSVTLQENLLLKFKPKIISLPPESNLKIVTSLENYQAVCQKLSNTVYGVNFCGLGEFHHLAYYLIK RVPVQEVAVVVFDNHPDLLPTFPGYISCGSWLLNVAELKKVVQIIVVGVTEISGLKSAPPTSVREKIILFLPQTQKKKIK KATIPVRYYDENNLLTEIHKSLKVKDIYISIDKDVLHPLDAVTTWEQGELRLNQLLSALAMLKEKYKIWGIDICGEYGSE LLKIQRIGERWATSQNERANLEILEILLGE >Mature_269_residues GLIFKDVGVIDLDGSVTLQENLLLKFKPKIISLPPESNLKIVTSLENYQAVCQKLSNTVYGVNFCGLGEFHHLAYYLIKR VPVQEVAVVVFDNHPDLLPTFPGYISCGSWLLNVAELKKVVQIIVVGVTEISGLKSAPPTSVREKIILFLPQTQKKKIKK ATIPVRYYDENNLLTEIHKSLKVKDIYISIDKDVLHPLDAVTTWEQGELRLNQLLSALAMLKEKYKIWGIDICGEYGSEL LKIQRIGERWATSQNERANLEILEILLGE
Specific function: Unknown
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006035 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: NA
Molecular weight: Translated: 30470; Mature: 30339
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLIFKDVGVIDLDGSVTLQENLLLKFKPKIISLPPESNLKIVTSLENYQAVCQKLSNTV CCEEEECCCEEECCCCEEEECCEEEEECCCEEECCCCCCCEEEEEHHHHHHHHHHHCCCE YGVNFCGLGEFHHLAYYLIKRVPVQEVAVVVFDNHPDLLPTFPGYISCGSWLLNVAELKK EEEEEECCCHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH VVQIIVVGVTEISGLKSAPPTSVREKIILFLPQTQKKKIKKATIPVRYYDENNLLTEIHK HHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCHHHHHHHHHCCCEEEECCCCHHHHHHH SLKVKDIYISIDKDVLHPLDAVTTWEQGELRLNQLLSALAMLKEKYKIWGIDICGEYGSE HCEEEEEEEEECHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHH LLKIQRIGERWATSQNERANLEILEILLGE HHHHHHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure GLIFKDVGVIDLDGSVTLQENLLLKFKPKIISLPPESNLKIVTSLENYQAVCQKLSNTV CEEEECCCEEECCCCEEEECCEEEEECCCEEECCCCCCCEEEEEHHHHHHHHHHHCCCE YGVNFCGLGEFHHLAYYLIKRVPVQEVAVVVFDNHPDLLPTFPGYISCGSWLLNVAELKK EEEEEECCCHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH VVQIIVVGVTEISGLKSAPPTSVREKIILFLPQTQKKKIKKATIPVRYYDENNLLTEIHK HHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCHHHHHHHHHCCCEEEECCCCHHHHHHH SLKVKDIYISIDKDVLHPLDAVTTWEQGELRLNQLLSALAMLKEKYKIWGIDICGEYGSE HCEEEEEEEEECHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHH LLKIQRIGERWATSQNERANLEILEILLGE HHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]