| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78044127
Identifier: 78044127
GI number: 78044127
Start: 1346203
End: 1346664
Strand: Direct
Name: 78044127
Synonym: CHY_1504
Alternate gene names: NA
Gene position: 1346203-1346664 (Clockwise)
Preceding gene: 78043586
Following gene: 78044783
Centisome position: 56.06
GC content: 32.9
Gene sequence:
>462_bases ATGAAAAAAGTAGCGTTCCAAACAATAGTCTTTGATAGCGATATGAATCCAGTTGTATTACTTATTGATGAAAATCAAGA ATTTGTCCTTCCTTTATTTTTTACTCCCAAAGAATTAGAACCTATTCTTTTTTCTTTGGAAAACTTTATTCCTGAACAAC CGGAAACTTATAACCTTCTTTTAGAAATTATCAAAACAAATAACTTAAAAGTTAAGGAACTAACTATTACCGACATCTTT GCCGATAGAGTATTTTCTGTATTAGCTTTAAAAAAAGGTCGGAAAGAACAGTTTTATAACTGCCGTATCAATGACGGACT TGCCCTGGCAATATATTTCAAAGCTCCCATCTACATTACCGAAAAAGTAGAATTATCCACCTATCCAGTGACCAGTTTAC CGGATGACCTGGAAAAAGAGCTCCAACCGTTAATAGAGGAATGGAAAAAATCTCTTAATTAA
Upstream 100 bases:
>100_bases TCAGTTATACTAAGAGTAACAACTTTTTTTTTTCTTTGTCAAGAAGGAAATTATCTCACAAAAGGCGAAAATAAATGTTT TAAAGAAGGAGGTACCAAGC
Downstream 100 bases:
>100_bases CCCCTTAATTTTGCAAGCACCCTTTGAAAGTCTTCCGGCAATGGAGCGGTAAACTCAAGTAATTCTCCAGAACGGGGATG AATAAAAGATAGCTTTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKKVAFQTIVFDSDMNPVVLLIDENQEFVLPLFFTPKELEPILFSLENFIPEQPETYNLLLEIIKTNNLKVKELTITDIF ADRVFSVLALKKGRKEQFYNCRINDGLALAIYFKAPIYITEKVELSTYPVTSLPDDLEKELQPLIEEWKKSLN
Sequences:
>Translated_153_residues MKKVAFQTIVFDSDMNPVVLLIDENQEFVLPLFFTPKELEPILFSLENFIPEQPETYNLLLEIIKTNNLKVKELTITDIF ADRVFSVLALKKGRKEQFYNCRINDGLALAIYFKAPIYITEKVELSTYPVTSLPDDLEKELQPLIEEWKKSLN >Mature_153_residues MKKVAFQTIVFDSDMNPVVLLIDENQEFVLPLFFTPKELEPILFSLENFIPEQPETYNLLLEIIKTNNLKVKELTITDIF ADRVFSVLALKKGRKEQFYNCRINDGLALAIYFKAPIYITEKVELSTYPVTSLPDDLEKELQPLIEEWKKSLN
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17818; Mature: 17818
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAFQTIVFDSDMNPVVLLIDENQEFVLPLFFTPKELEPILFSLENFIPEQPETYNLL CCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHH LEIIKTNNLKVKELTITDIFADRVFSVLALKKGRKEQFYNCRINDGLALAIYFKAPIYIT HHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCEEEE EKVELSTYPVTSLPDDLEKELQPLIEEWKKSLN EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKVAFQTIVFDSDMNPVVLLIDENQEFVLPLFFTPKELEPILFSLENFIPEQPETYNLL CCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHH LEIIKTNNLKVKELTITDIFADRVFSVLALKKGRKEQFYNCRINDGLALAIYFKAPIYIT HHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCEEEE EKVELSTYPVTSLPDDLEKELQPLIEEWKKSLN EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA