Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is vorB [H]

Identifier: 78044081

GI number: 78044081

Start: 35012

End: 36067

Strand: Direct

Name: vorB [H]

Synonym: CHY_0043

Alternate gene names: 78044081

Gene position: 35012-36067 (Clockwise)

Preceding gene: 78044629

Following gene: 78043364

Centisome position: 1.46

GC content: 48.2

Gene sequence:

>1056_bases
GTGTTTATGACCGGGAACGAGGTTATCGCTTATGCGGCGGTGATGGCCGAAGCGGATATTATGTACGGTTACCCGATTAC
TCCCCAAAACGAAATTATGCACTACTGGACCAGGCTTGCGCCAAAATACGGCAAAAAGTTTTTACAAACCGAGGACGAGC
TCTCGGCTGGTTTTACTACCATAGGAGGGGTCCTGGCCGGAAGAAAGGCTTTTACCGCCACTGCCGGTCCTGGCAACACC
TTGATGCAGGAGCCGATGTCCATGGCGGAAATGATGCGGATTCCCACCCTCTTGATAGTACAACAGCGGGGTGGTCCATC
AACGGCTACCGTTATTTATTCCCAGCAGGAAGTAACGATGACCACCTATGGTGGCAACGGTGAAGGCTTTAGAATTGTCT
ACTCTACCGCAAGCCACCAGGACCTTTATGATTATGTAATTAAAGGTTTTAATACCGCGTGGAAATACCGTTTCCCCACC
TTTATCTTGGGCGATGGTTATCAAGCCAAAATGCGGGAAGCCTGTGTTATGTACGATCCTGCCGAAAGAGGGATCGAACT
TGTAAAACCTACTCCTTACATGGGTGCTCCCGGCACTCCCGGGGTAGACCGCAAACCAAGTCATATGCGGAACACCTACA
ACACCGAGGAAGAGCTGTATGAAGTGGTCATGAACCTTGCCAAAGCGTACGAAGCCATAATACCGGAAGTGGTAGAATTT
GAGGAACTAAATGCCTTTGAAGCGGATACCGTTATCATTGCCCACGGTGTCGTTTCCCGGGCGGCCAAAGGAGCGGTAAA
AGAACTTCTTGCCGAAGGTGAGAAAAAAGTTGGCTATTTCCGGCCAATTACCTTAAGACCTCTTGCGGTAAACGAACTAC
GGGAAATTGCTCAAAGAGCCAAGAAACTGATTATAGCAGAATCTTCCTATGGTCAGCTTTTAAAGCAAATTAAAGAAGCA
ATTTACGGAACCGATGTTGAAATACACACCATCTTAAAGCCGGGTGTGGGCATTACCCAGGAAGAAATCGTGGCCAAGTA
CCACGAGGTTAAATAA

Upstream 100 bases:

>100_bases
CCCGGTTAAGGGGTTAGTAAGATACATGCCAAAAACTTTTTGGTAATACTACGAGGAGGTGCGAAAAATGGCAAATAAGC
CAATTACCGGGGAGCAAAGA

Downstream 100 bases:

>100_bases
GGGAGGGATAAAGGTGAACTATCCGCAAATACCAAAAAGCTGGAATATAGAATCAAAACCCCATAAGTTTTGCCCCGGCT
GTGGCCACGGGATAGCTTTG

Product: putative keto/oxoacid ferredoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTTIGGVLAGRKAFTATAGPGNT
LMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTMTTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPT
FILGDGYQAKMREACVMYDPAERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF
EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRAKKLIIAESSYGQLLKQIKEA
IYGTDVEIHTILKPGVGITQEEIVAKYHEVK

Sequences:

>Translated_351_residues
MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTTIGGVLAGRKAFTATAGPGNT
LMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTMTTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPT
FILGDGYQAKMREACVMYDPAERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF
EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRAKKLIIAESSYGQLLKQIKEA
IYGTDVEIHTILKPGVGITQEEIVAKYHEVK
>Mature_351_residues
MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTTIGGVLAGRKAFTATAGPGNT
LMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTMTTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPT
FILGDGYQAKMREACVMYDPAERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF
EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRAKKLIIAESSYGQLLKQIKEA
IYGTDVEIHTILKPGVGITQEEIVAKYHEVK

Specific function: Unknown

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N [H]

EC number: =1.2.7.7 [H]

Molecular weight: Translated: 39058; Mature: 39058

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTT
CCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHCCHHH
IGGVLAGRKAFTATAGPGNTLMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTM
HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEE
TTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPTFILGDGYQAKMREACVMYDP
EEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHEEECC
AERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF
HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRA
HHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCEECCCCHHHHHHHHHHH
KKLIIAESSYGQLLKQIKEAIYGTDVEIHTILKPGVGITQEEIVAKYHEVK
HHEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTT
CCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHCCHHH
IGGVLAGRKAFTATAGPGNTLMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTM
HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEE
TTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPTFILGDGYQAKMREACVMYDP
EEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHEEECC
AERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF
HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRA
HHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCEECCCCHHHHHHHHHHH
KKLIIAESSYGQLLKQIKEAIYGTDVEIHTILKPGVGITQEEIVAKYHEVK
HHEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]