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The map label for this gene is ssb [H]

Identifier: 78044015

GI number: 78044015

Start: 28661

End: 29092

Strand: Direct

Name: ssb [H]

Synonym: CHY_0036

Alternate gene names: 78044015

Gene position: 28661-29092 (Clockwise)

Preceding gene: 78042831

Following gene: 78043292

Centisome position: 1.19

GC content: 48.15

Gene sequence:

>432_bases
ATGTTTAATAAAGTTATTTTAATAGGGAGGCTGACCCGGGACCCGGAGCTTAGACATACACCCCAGGGAACGCCGGTAGC
ATCGATCACCGTTGCGGTAGACCGTCCTTTTACCACCAAAGAAGGGCAACGGGAAACCGACTTTATTGATGTGGTGGTTT
GGCAGAAACTTGCCGAAACCGTCGCCCGCGTCTTAACCAAAGGACGGCTTGTTATGGTGGAAGGAAGACTGCAAATTAGA
AGCTATACCGATAAAGAAGGCCAGAAACGGCGGGTTTATGAAGTAGTGGGGGAAAACGTGAGGTTTTTAGATAAACCCAA
GAATGCTGGATTGGCTCCTGGCAACTTACCTGACGAGTTTCCTGCGGTGGACTTTGACCCGTCGGATTTTGGTACGGAAA
TCGAGATTAGCGATGAAGATATCCCATTTTAA

Upstream 100 bases:

>100_bases
GGAAACTGCACAAGAGCTTGACCGGCTTTTAAGAATTTCCGATGATGTTGTGCGGCATATTGTTATTCGGGAAGACAAGT
AACCTTTTGGGGTGAATTTT

Downstream 100 bases:

>100_bases
CGTAAGGGAGGTTGGACCGTGAAAAAAGAAAAAGGTAGCCGTCGCAAAAAGCGGGTATGTGCTTTTTGCGTGGATAAAAT
AGTAGATGTAGATTACAAAG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MFNKVILIGRLTRDPELRHTPQGTPVASITVAVDRPFTTKEGQRETDFIDVVVWQKLAETVARVLTKGRLVMVEGRLQIR
SYTDKEGQKRRVYEVVGENVRFLDKPKNAGLAPGNLPDEFPAVDFDPSDFGTEIEISDEDIPF

Sequences:

>Translated_143_residues
MFNKVILIGRLTRDPELRHTPQGTPVASITVAVDRPFTTKEGQRETDFIDVVVWQKLAETVARVLTKGRLVMVEGRLQIR
SYTDKEGQKRRVYEVVGENVRFLDKPKNAGLAPGNLPDEFPAVDFDPSDFGTEIEISDEDIPF
>Mature_143_residues
MFNKVILIGRLTRDPELRHTPQGTPVASITVAVDRPFTTKEGQRETDFIDVVVWQKLAETVARVLTKGRLVMVEGRLQIR
SYTDKEGQKRRVYEVVGENVRFLDKPKNAGLAPGNLPDEFPAVDFDPSDFGTEIEISDEDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=114, Percent_Identity=40.3508771929825, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16158; Mature: 16158

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKVILIGRLTRDPELRHTPQGTPVASITVAVDRPFTTKEGQRETDFIDVVVWQKLAET
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VARVLTKGRLVMVEGRLQIRSYTDKEGQKRRVYEVVGENVRFLDKPKNAGLAPGNLPDEF
HHHHHCCCCEEEEECCEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
PAVDFDPSDFGTEIEISDEDIPF
CCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MFNKVILIGRLTRDPELRHTPQGTPVASITVAVDRPFTTKEGQRETDFIDVVVWQKLAET
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VARVLTKGRLVMVEGRLQIRSYTDKEGQKRRVYEVVGENVRFLDKPKNAGLAPGNLPDEF
HHHHHCCCCEEEEECCEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
PAVDFDPSDFGTEIEISDEDIPF
CCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]