Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78043964

Identifier: 78043964

GI number: 78043964

Start: 2364692

End: 2365672

Strand: Direct

Name: 78043964

Synonym: CHY_2660

Alternate gene names: NA

Gene position: 2364692-2365672 (Clockwise)

Preceding gene: 78043428

Following gene: 78044372

Centisome position: 98.47

GC content: 29.46

Gene sequence:

>981_bases
ATGGAAACAGATAAAAAAAGTATTATACTTAATTTATACTGTGATGAAATAAAAGAATACCCTCTTAAAATACCTTTTAT
TAACACTTTTGAAAAATGGACATATATAGGAATGCTTATTGTACCAGAATTTATATCTGATAAGCTCTACAAAGATTTGA
TAAACTTACGATGTCTTTCACAACCACCTAAACCGTGGGGTAGTTGCTCAGAGCCTTGTCCTTACCACAATTTAAATAAT
ACAGAAATCCATTATCAAAACACAGATGATTCAATAAAATATAAGATAGCTTCCAATTGGGTAAAGTATTGGCTTGATGA
CAGGGAAAATATCTACTTTTACATACTCGGTATTAACCTTACAAAATTAGATCTGGATAAATTCGGCCCCAAAAATCAAA
AAGATAAACACTCAACTATTTACAATAGATTTTTTAGAACTGCACTAAAAAAGGCTTTGAAAACTTATTTTAGAGATTAT
GATAGCATAATCGTCAAAAATATTTTTCATGATAAAGGCAATGCTGAATACCATGAATATTTCCCATGGCACTCTATTTA
TAAGTTACAATCCGAAGAAGATAAAATTTATTTTGCCAACAACCATATAAAATTCATTAATTCCGACCACCGCAAACCCG
ACGGAGATCCTGTACATTCACAGTTTATCCAATTTATTGATATAATTCTTGGATGTTTTGCAAATAGTCTTCATTTAAAT
GCGACGAGTAAAAATAAATATTCTCTAACAGTTAGTGCTTTTCCTATTATAAGGCGAATTATAAAAAACCCTAATAACCC
TAACAGCAGATATAACTACTATAAAAGACAAATGGTACAGTTTTTCCCCAAGGAAGATTTAAAAGGTATGGATGAACAAA
GCCTTGAATACAGATATAAAAAGTTAAATCAATTCTATACTAATAGAGAGTTACCAATAGAAAGAAAAATAAACGGACAA
TTATCCATATTTGATTTATAA

Upstream 100 bases:

>100_bases
CGTAGCACTTATTCCCTTTTTCTTAATCAATTTTTAGCTGCTATTTTTTTGCCCTTTAATGTTATAATTATGGTGAATAA
TTCCAAAAGGAAGGATATAT

Downstream 100 bases:

>100_bases
AATATTACTCTTAATAAACAAAATCATTTTTCTTTACATTAAGAAAGCAATAAATTACTTATTATAGGCTAAAATCTCCC
ATATAAAAATTATTATACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLSQPPKPWGSCSEPCPYHNLNN
TEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINLTKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDY
DSIIVKNIFHDKGNAEYHEYFPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN
ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYKKLNQFYTNRELPIERKINGQ
LSIFDL

Sequences:

>Translated_326_residues
METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLSQPPKPWGSCSEPCPYHNLNN
TEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINLTKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDY
DSIIVKNIFHDKGNAEYHEYFPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN
ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYKKLNQFYTNRELPIERKINGQ
LSIFDL
>Mature_326_residues
METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLSQPPKPWGSCSEPCPYHNLNN
TEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINLTKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDY
DSIIVKNIFHDKGNAEYHEYFPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN
ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYKKLNQFYTNRELPIERKINGQ
LSIFDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39126; Mature: 39126

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLS
CCCCCCEEEEEEEHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QPPKPWGSCSEPCPYHNLNNTEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINL
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEEEE
TKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDYDSIIVKNIFHDKGNAEYHEY
EEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
FPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN
CCHHHHEEECCCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYK
ECCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHH
KLNQFYTNRELPIERKINGQLSIFDL
HHHHHHCCCCCCEEECCCCEEEEEEC
>Mature Secondary Structure
METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLS
CCCCCCEEEEEEEHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QPPKPWGSCSEPCPYHNLNNTEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINL
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEEEE
TKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDYDSIIVKNIFHDKGNAEYHEY
EEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
FPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN
CCHHHHEEECCCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYK
ECCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHH
KLNQFYTNRELPIERKINGQLSIFDL
HHHHHHCCCCCCEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA