| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is iorA [H]
Identifier: 78043951
GI number: 78043951
Start: 103803
End: 105548
Strand: Direct
Name: iorA [H]
Synonym: CHY_0121
Alternate gene names: 78043951
Gene position: 103803-105548 (Clockwise)
Preceding gene: 78044039
Following gene: 78044852
Centisome position: 4.32
GC content: 49.83
Gene sequence:
>1746_bases ATGGCCAGGTTAATGACCGGAAACGAAGCGATTGCCCGGGGTGCTTTTGAAGCGGGGGTAAAAATTGGGGTGGGCTATCC CGGTACTCCCAGTACGGAGATTTTGGAGAATTTTGCCAGGTACCCGGGGGTCTATGCCCAGTGGTCGCCCAATGAGAAAG TAGCTTTAGAGGTGGGGATTGGAGCTTCCCTTGCCGGAGCTCGAACCCTGGTGACCATGAAACATGTTGGGGTGAACGTG GCAGCGGATTCGCTTTTAACCTTGAGCTATACCGGTGTAAATGCGGGGCTGGTGCTGGTATCCGCCGATGATCCCGGACT GCACAGTTCCCAGAACGAACAGGATAACCGTTATTACGGTAAACTGGCTAAAATACCGGTATTGGAACCCTCGGACAGTG AAGAGGCCCGCAAGTTTGTGAAACTTGCCTATGAATTAAGTGAAGAGTTTGATACACCGGTTATTTTAAGGACAACCACC AGGATTGCCCATACCCATACGTTAGTGATTGAGGAGGAACCCCGGGAGGTAAGCTTAAAGCCGTACGTTAAAAACCCGCA AAAGTACGTGATGGTTCCGGGAAATGCCCGGTTGCGCCATCAGGTGGTGGAGGAGCGACGGCAGAAGCTTTTGGAATATG CCGAAATTACTCCGTTAAACCGGATAGAAGAGGGAACGGGGGATGTGGGCTTTATTACGTCGGGAATAAGCTACCAGTAT GTTAAAGAAGCTTTTCCCGGCTCTCCGGTTTTAAAGCTCGGACTTACCTGGCCGCTTCCGGAAAAACTTATTTTAAAATT TGCCGAAAAGGTTAAAACCATCATAGTGGTGGAAGAATTGGAGCCGTACATAGAAGAACACGTGCGTGCCCTGGGGTTAA AAGTCGTGGGCAAGGAAATTATCCCCCGTACCGGTGAGTTAAACCACTATATTGTGCAAAAGGCGGTTTTAAAATACCTG GGAGAGGATATAGCCGATTTCCTTGAGAATTTGGATTTACCCCAGAGGCCGCCGGTAATGTGTCCGGGCTGTCCGCACCG GCCGGTGTTTTATATTTTAAGTGAACTTAAACTTACGGTAACCGGTGATATCGGCTGCTACACCTTAGGGGTAATGCCAC CTTTAGGGGCAATTGATACTACCGTTTGCATGGGAGCGGGCATCGGAATGGCTTTAGGAATGGAAAAAGCCAATCCGGAT TTTTCCGGGAAAACGGTAGCGGTTATTGGCGATTCAACTTTTTTACATTCGGGGATTACACCTTTAATCGATATGGTATA TAATGGAGGCAAAGGGACTATATTAATACTGGATAACCGCACCACGGCAATGACCGGCCACCAGCCCCACCCGGCAACGG GTAAAACCTTAATGGGAGAACCGGCACCTCAAGTGGATTTTGAGGCGTTGGCCAGGGCGTTAGGGGTAAAGCGGGTTACG ACCGTTGATCCCTTTGATCTGCAGCAACTGAGAGCGGTTATAACCGAGGAAGTAGCGGCCGGAGAGGTATCGGTAGTGGT GGTGCGGCGGGAATGTGCGCTGTTGCCCAATCAAACCCGGGAGCCCCTAACGGTAATTTCGGAAAAATGTACCGGTTGCC AGCGCTGCTTGAAGTTAGGCTGCCCGGCAATAGCCATTAAAGATAAGAAAGCTTCTATTGACCCGCTTTTATGTAACGGT TGCGGGGTATGTGCCCAGGTTTGTAAATTTTCGGCCATAATAAAGGGTGGTGATTCCCTTGGATAA
Upstream 100 bases:
>100_bases CGCCAAGGTAAAGCTTTTGGAACCAAGGTCCCTGGAGCGCTCCGAAGGTAAAGCCAAACGAGTAATAGATTTAAGAAATA GCGGAGAAAGGGGATAGAGA
Downstream 100 bases:
>100_bases AAATATTTTACTGGCCGGAGTTGGCGGGCAGGGGACTATTCTGGCAAGTAAAATTATTGCCGGGGTAGCGGAAAAGGCTG GACTTGATGTTAAAGTAGCC
Product: indolepyruvate ferredoxin oxidoreductase subunit IorA
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGIGASLAGARTLVTMKHVGVNV AADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYGKLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTT RIAHTHTLVIEEEPREVSLKPYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEIIPRTGELNHYIVQKAVLKYL GEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTVTGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPD FSGKTVAVIGDSTFLHSGITPLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLGCPAIAIKDKKASIDPLLCNG CGVCAQVCKFSAIIKGGDSLG
Sequences:
>Translated_581_residues MARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGIGASLAGARTLVTMKHVGVNV AADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYGKLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTT RIAHTHTLVIEEEPREVSLKPYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEIIPRTGELNHYIVQKAVLKYL GEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTVTGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPD FSGKTVAVIGDSTFLHSGITPLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLGCPAIAIKDKKASIDPLLCNG CGVCAQVCKFSAIIKGGDSLG >Mature_580_residues ARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGIGASLAGARTLVTMKHVGVNVA ADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYGKLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTTR IAHTHTLVIEEEPREVSLKPYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQYV KEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEIIPRTGELNHYIVQKAVLKYLG EDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTVTGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPDF SGKTVAVIGDSTFLHSGITPLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVTT VDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLGCPAIAIKDKKASIDPLLCNGC GVCAQVCKFSAIIKGGDSLG
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 62896; Mature: 62765
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGI CCEEECCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECC GASLAGARTLVTMKHVGVNVAADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYG CCCCCCCHHEEEHHHCCCEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHH KLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTTRIAHTHTLVIEEEPREVSLK HHEECEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCCCCEECC PYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHHH VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEI HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH IPRTGELNHYIVQKAVLKYLGEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCEEEE TGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPDFSGKTVAVIGDSTFLHSGIT ECCCCEEEEECCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCHHHHCCHH PLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT HHHHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLG CCCCCCHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC CPAIAIKDKKASIDPLLCNGCGVCAQVCKFSAIIKGGDSLG CCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGI CEEECCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECC GASLAGARTLVTMKHVGVNVAADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYG CCCCCCCHHEEEHHHCCCEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHH KLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTTRIAHTHTLVIEEEPREVSLK HHEECEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCCCCEECC PYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHHH VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEI HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH IPRTGELNHYIVQKAVLKYLGEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCEEEE TGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPDFSGKTVAVIGDSTFLHSGIT ECCCCEEEEECCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCHHHHCCHH PLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT HHHHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLG CCCCCCHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC CPAIAIKDKKASIDPLLCNGCGVCAQVCKFSAIIKGGDSLG CCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]