| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is mntH [H]
Identifier: 78043910
GI number: 78043910
Start: 331132
End: 332382
Strand: Direct
Name: mntH [H]
Synonym: CHY_0385
Alternate gene names: 78043910
Gene position: 331132-332382 (Clockwise)
Preceding gene: 78044322
Following gene: 78044815
Centisome position: 13.79
GC content: 38.53
Gene sequence:
>1251_bases ATGAAAAAGTTTAAAGTAACTAATAAGTTTTTGCAAAAAAGTTTATATGTTTTAAGTATAATTGGCCCGGGGCTTATTAC GGTAAATGCGGGAAATGATGCCGGAGGTATCGCTACTTATGCCGCCGTAGGGGCGTTATACGGTTACCGCATGCTTTGGG GATTATTGTTAATTACCTTTAGCTTAGCAGTAATCCAGGAAATGAACGCCCGGATGGCGGTGGTCACCGGTAAAGGTTTA TCGGATCTTATTCGCGAAAATTTTGGGGTAAAAGTGACTTTTTTGGCAATGGTGATTTTATTTGTTGCTAATCTTGGGGT ATGCATTGGCGATTTTGCGGGAATTGCTGCAAGCTTAGAACTTTTTGGTGTGGCTAAATTTGTTTCCGTACCTTTGATGG CATTTTTTATCTGGTATGTTATTATTAAGGGTTCTTATTCCCGGCTGGAAAAAATTCTTCTTTTATTTACTGTCGTATTT TTTTCTTATATCATAACTGCCTTTGTGGTTAAACCAAACTGGTCCGAAGTTTTTAAGGCTACCGTTATCCCTTCGATTAT ACCCAGAAAGGATTATATCCTGACTTTTATTGGCATGATCGGTACGACGATTACCCCTTATATGCAGTTTTACCTGCAGG GTTCCATTGCGGACAAAGGGCTGAGCCTGAAAGATTATAAATACGAAAAGCTCGATGTTTATTTTGGGGCGTTCTGGGGA GATTTAGTTTCTTTTTTTATCATTGTTACCACTGCTGCCACCCTTTATAAAGCTGGTATAAAAATTGAAACAGCCCAGGA CGCAGCGCTTGCTTTAAAACCGCTGGCCGGGCAGTATGCTTCATTACTATTTGGCATAGGACTTTTAGGAGCTTCTATTT TGGCAGCAATAGTTATTCCCCTTTCTACGGCTTATGCGGTTACAGAAGCTTTTGGGTTTGAGCGGGGTTTGGATAAAAGT TTTGGCGAAGCCCCGGTGTTTTACGGTATATTTACCTTTATGATTTTTATAAGTGCTTTATTAATACTGCTTCCGAAGAT TTCATTAGTGGGAATAATGCTGGCTACCCAGCAGTTGGCCGGCATTTTATCACCAATTATTTTAATTTTAATGGTGCTTT TAACCAGTAAAAAAGAACTAATGGGTGAGCTGGTTAATAATCGCCTGCAAAGTATTATTGTCTGGGTTACTGTTATTTTT ATTATTATTTTAACGATAACTTTGGTTATGGCGAGCTTTTTTAATTTTTAA
Upstream 100 bases:
>100_bases AACCTCTTAGCTTTACCGGTTGTGGATAAAGATAATCGGCCTATCGGCATAATAACAGTGGATGATGTGATGGACTTACT CTTGCCCGGAGGTTATCACC
Downstream 100 bases:
>100_bases TTAAAACCAGGACTTTAAATACCTCTCCCATTGGGGGGAGGATTAATTTTTTTATTTTTAAAGTTTCCTGGTAGCTTTCT AAAGGCCGGGTAAGGTCATC
Product: putative cation transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKKFKVTNKFLQKSLYVLSIIGPGLITVNAGNDAGGIATYAAVGALYGYRMLWGLLLITFSLAVIQEMNARMAVVTGKGL SDLIRENFGVKVTFLAMVILFVANLGVCIGDFAGIAASLELFGVAKFVSVPLMAFFIWYVIIKGSYSRLEKILLLFTVVF FSYIITAFVVKPNWSEVFKATVIPSIIPRKDYILTFIGMIGTTITPYMQFYLQGSIADKGLSLKDYKYEKLDVYFGAFWG DLVSFFIIVTTAATLYKAGIKIETAQDAALALKPLAGQYASLLFGIGLLGASILAAIVIPLSTAYAVTEAFGFERGLDKS FGEAPVFYGIFTFMIFISALLILLPKISLVGIMLATQQLAGILSPIILILMVLLTSKKELMGELVNNRLQSIIVWVTVIF IIILTITLVMASFFNF
Sequences:
>Translated_416_residues MKKFKVTNKFLQKSLYVLSIIGPGLITVNAGNDAGGIATYAAVGALYGYRMLWGLLLITFSLAVIQEMNARMAVVTGKGL SDLIRENFGVKVTFLAMVILFVANLGVCIGDFAGIAASLELFGVAKFVSVPLMAFFIWYVIIKGSYSRLEKILLLFTVVF FSYIITAFVVKPNWSEVFKATVIPSIIPRKDYILTFIGMIGTTITPYMQFYLQGSIADKGLSLKDYKYEKLDVYFGAFWG DLVSFFIIVTTAATLYKAGIKIETAQDAALALKPLAGQYASLLFGIGLLGASILAAIVIPLSTAYAVTEAFGFERGLDKS FGEAPVFYGIFTFMIFISALLILLPKISLVGIMLATQQLAGILSPIILILMVLLTSKKELMGELVNNRLQSIIVWVTVIF IIILTITLVMASFFNF >Mature_416_residues MKKFKVTNKFLQKSLYVLSIIGPGLITVNAGNDAGGIATYAAVGALYGYRMLWGLLLITFSLAVIQEMNARMAVVTGKGL SDLIRENFGVKVTFLAMVILFVANLGVCIGDFAGIAASLELFGVAKFVSVPLMAFFIWYVIIKGSYSRLEKILLLFTVVF FSYIITAFVVKPNWSEVFKATVIPSIIPRKDYILTFIGMIGTTITPYMQFYLQGSIADKGLSLKDYKYEKLDVYFGAFWG DLVSFFIIVTTAATLYKAGIKIETAQDAALALKPLAGQYASLLFGIGLLGASILAAIVIPLSTAYAVTEAFGFERGLDKS FGEAPVFYGIFTFMIFISALLILLPKISLVGIMLATQQLAGILSPIILILMVLLTSKKELMGELVNNRLQSIIVWVTVIF IIILTITLVMASFFNF
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
Organism=Escherichia coli, GI1788736, Length=412, Percent_Identity=26.2135922330097, Blast_Score=102, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 45520; Mature: 45520
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFKVTNKFLQKSLYVLSIIGPGLITVNAGNDAGGIATYAAVGALYGYRMLWGLLLITF CCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLAVIQEMNARMAVVTGKGLSDLIRENFGVKVTFLAMVILFVANLGVCIGDFAGIAASLE HHHHHHHCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGVAKFVSVPLMAFFIWYVIIKGSYSRLEKILLLFTVVFFSYIITAFVVKPNWSEVFKA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TVIPSIIPRKDYILTFIGMIGTTITPYMQFYLQGSIADKGLSLKDYKYEKLDVYFGAFWG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHH DLVSFFIIVTTAATLYKAGIKIETAQDAALALKPLAGQYASLLFGIGLLGASILAAIVIP HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTAYAVTEAFGFERGLDKSFGEAPVFYGIFTFMIFISALLILLPKISLVGIMLATQQLA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILSPIILILMVLLTSKKELMGELVNNRLQSIIVWVTVIFIIILTITLVMASFFNF HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKFKVTNKFLQKSLYVLSIIGPGLITVNAGNDAGGIATYAAVGALYGYRMLWGLLLITF CCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLAVIQEMNARMAVVTGKGLSDLIRENFGVKVTFLAMVILFVANLGVCIGDFAGIAASLE HHHHHHHCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGVAKFVSVPLMAFFIWYVIIKGSYSRLEKILLLFTVVFFSYIITAFVVKPNWSEVFKA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TVIPSIIPRKDYILTFIGMIGTTITPYMQFYLQGSIADKGLSLKDYKYEKLDVYFGAFWG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHH DLVSFFIIVTTAATLYKAGIKIETAQDAALALKPLAGQYASLLFGIGLLGASILAAIVIP HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTAYAVTEAFGFERGLDKSFGEAPVFYGIFTFMIFISALLILLPKISLVGIMLATQQLA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILSPIILILMVLLTSKKELMGELVNNRLQSIIVWVTVIFIIILTITLVMASFFNF HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]