| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is hppA
Identifier: 78043894
GI number: 78043894
Start: 252458
End: 254518
Strand: Direct
Name: hppA
Synonym: CHY_0286
Alternate gene names: 78043894
Gene position: 252458-254518 (Clockwise)
Preceding gene: 78044803
Following gene: 78042955
Centisome position: 10.51
GC content: 50.22
Gene sequence:
>2061_bases ATGGAAAACGGGATGACTTTAGCTTATTACGGCTTGGGAGCGGGGATCTTAGCAATTCTTTTTGCCCTGTATCTTTTTTC CTCGGTTTTAAAGGAAGATATGGGGAATGAAAAAATGCGGGAGATTTCCCAGGCCATCTTTGAAGGGGCTATGGCGTATT TAAACCGCCAGTACAAGACGTTAATTCCTTTTGCCCTTGTGGTTTTTGTTTTGCTGGTTGTTGGTTTTGGTTATAAGGAA GGGGACTTTGGCTACGGACTTAAAGTTGGTGTATCGTTTCTGGTAGGTGCTATTGCCTCGGCTCTTGCCGGTTATGCCGG GATGACCAGTACCACCAAAGCTAATGCCCGGACGACCCAGGCTGCGCGGAAAAGCTTGAACGCTGCCTTAAACGTAGCCT TCAGAGCCGGTGGCGTCATGGGGATGTCCGTTGCCGGGCTTGGTTTACTTGGTGTTTCGGCCTTATATATTATTTTTAAA GATGTTCATGTTATCGATAGCTTTGCCTTTGGGGCTTCGGCCATTGCTTTCTTTGCCCGGGTTGGCGGTGGTATTTATAC CAAAGCCGCTGACGTTGGTGCCGACCTGGTGGGTAAAGTTGAAGCGGGTATTCCCGAAGACGATCCCAGAAACCCGGCGG TTATTGCGGACAACGTGGGGGACAACGTTGGCGATACTGCCGGTATGGGTGCCGACTTGTTTGAATCTTACGGCGCTACC ACCATGGCAGCTATGCTCTTAGGCCTTACCTTTGCCAAGAACCACGGCTTTAGTGAAGTTTTAGGTGCAACTTTCCCGTT GCTTCTCGGGGCGGCGGGGATTGTAGCGGCAATTATCAGTACTTTCTTTGTGCGGACTTCCGAAGATGGAAATCCCCAAA TGGCTTTAAATATTGGTTTGTGGTCTACCAACTTTATTACGGCAATCTTTACCTACATTATAGCCCAGTACGTATTTGGC AGTGAGTGGGCTCCGAAAATCTTTATCGCGGTAGTTTCCGGTTTAGTGGTTAACGTGGCAATTGGCTCCTTAACCGAATA CTATACCTCCAACTTAAAGCCTCCGGCTCAAAAAATTGCTGAGGCTTCCACCACCGGTCCGGCAACTAACATCATTTCCG GGATTGCGGTTGGTATGCGGAGTACGTACTTACCCATTATCGTAATTGTAGCGGCTATTATGGTGGGCTACTGGGCTGCA GGCTTTTACGGAATTGCTCTGGCGGCCATGGGAATGCTGGCTACTGCCGCTATGGTTGTGGCGGTGGACTCCTTTGGTCC GGTGGCCGACAACGCCGGTGGTATTGCAGAAATGGCGGAACTTGGTCCGGAAATCCGGAATAAAACCGACAAGCTCGATG CCGTTGGTAACACCACTGCAGCGGTAGCTAAAGGGTTTGCCATTGGTTCTGCGGCTTTAACTGCCCTTGCTTTATTCTCT GCTTATACCGACCTGGCCAAAACTAACCCCAACTTGCAAAAGTACCTGGTAAACGGCAAGTTTGACTTAAATATTACCGA TCCATGGGTCTTAGTGGGTCTCTTCCTGGGTGGTACCGTGGCCTTTTTAGTAGCGGCTCTAACTATGGAGTCGGTAGGAA AAGCGGCTTTTGACATGATTGAAGAGGTACGGCGCCAGTTTAGAGAGATTCCCGGTCTCATGGAAGGAAAAGCCCGGCCC GATTATGCCCGCTGTGTTTCCATCAGTACGGCAGCGGCGATCCGGCAGATGATTGCACCGGGCTTACTGGCGGTTGGTGC TCCTCTGGCTATTGGCTTTATCCTTGGCTTTAAAGCATTGACCGGTTATTTAGCCGGCGTTACCGCAACCGGAGTGCTTT TAGCCATTTATATGGCCAATGCTGGCGGTGCCTGGGATAACGCGAAAAAATATATAGAAGCGGGAAATCTTGGCGGAAAA GGTAGCGATACGCACAAAGCAGCGGTAGTGGGCGATACCGTTGGCGACCCCTTCAAAGATACTTCTGGCCCTGCGATGAA CCCGCTGATGAAAGTGGCCGGAACCTTTGCGCTGATCATTGTGCCCCTGTTGCTATTCTAA
Upstream 100 bases:
>100_bases GACGGTAGTTGCGGTAATTTTATTTATGATTTTGTCGTTGGTGCTGGCTTTACTTTTTTAAAGATAAATAATTTATTTTA AAAATTGAGGAGGGTGAGAA
Downstream 100 bases:
>100_bases AAGAATCTAACGGAGCAGCCCTAATAAGTAGGGCTGCTTTTTTATTACCTTTCCCAATCTTGCCGCGGAAGAAATTACCT GCTAAAATGAGACCAGAAAG
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MENGMTLAYYGLGAGILAILFALYLFSSVLKEDMGNEKMREISQAIFEGAMAYLNRQYKTLIPFALVVFVLLVVGFGYKE GDFGYGLKVGVSFLVGAIASALAGYAGMTSTTKANARTTQAARKSLNAALNVAFRAGGVMGMSVAGLGLLGVSALYIIFK DVHVIDSFAFGASAIAFFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDTAGMGADLFESYGAT TMAAMLLGLTFAKNHGFSEVLGATFPLLLGAAGIVAAIISTFFVRTSEDGNPQMALNIGLWSTNFITAIFTYIIAQYVFG SEWAPKIFIAVVSGLVVNVAIGSLTEYYTSNLKPPAQKIAEASTTGPATNIISGIAVGMRSTYLPIIVIVAAIMVGYWAA GFYGIALAAMGMLATAAMVVAVDSFGPVADNAGGIAEMAELGPEIRNKTDKLDAVGNTTAAVAKGFAIGSAALTALALFS AYTDLAKTNPNLQKYLVNGKFDLNITDPWVLVGLFLGGTVAFLVAALTMESVGKAAFDMIEEVRRQFREIPGLMEGKARP DYARCVSISTAAAIRQMIAPGLLAVGAPLAIGFILGFKALTGYLAGVTATGVLLAIYMANAGGAWDNAKKYIEAGNLGGK GSDTHKAAVVGDTVGDPFKDTSGPAMNPLMKVAGTFALIIVPLLLF
Sequences:
>Translated_686_residues MENGMTLAYYGLGAGILAILFALYLFSSVLKEDMGNEKMREISQAIFEGAMAYLNRQYKTLIPFALVVFVLLVVGFGYKE GDFGYGLKVGVSFLVGAIASALAGYAGMTSTTKANARTTQAARKSLNAALNVAFRAGGVMGMSVAGLGLLGVSALYIIFK DVHVIDSFAFGASAIAFFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDTAGMGADLFESYGAT TMAAMLLGLTFAKNHGFSEVLGATFPLLLGAAGIVAAIISTFFVRTSEDGNPQMALNIGLWSTNFITAIFTYIIAQYVFG SEWAPKIFIAVVSGLVVNVAIGSLTEYYTSNLKPPAQKIAEASTTGPATNIISGIAVGMRSTYLPIIVIVAAIMVGYWAA GFYGIALAAMGMLATAAMVVAVDSFGPVADNAGGIAEMAELGPEIRNKTDKLDAVGNTTAAVAKGFAIGSAALTALALFS AYTDLAKTNPNLQKYLVNGKFDLNITDPWVLVGLFLGGTVAFLVAALTMESVGKAAFDMIEEVRRQFREIPGLMEGKARP DYARCVSISTAAAIRQMIAPGLLAVGAPLAIGFILGFKALTGYLAGVTATGVLLAIYMANAGGAWDNAKKYIEAGNLGGK GSDTHKAAVVGDTVGDPFKDTSGPAMNPLMKVAGTFALIIVPLLLF >Mature_686_residues MENGMTLAYYGLGAGILAILFALYLFSSVLKEDMGNEKMREISQAIFEGAMAYLNRQYKTLIPFALVVFVLLVVGFGYKE GDFGYGLKVGVSFLVGAIASALAGYAGMTSTTKANARTTQAARKSLNAALNVAFRAGGVMGMSVAGLGLLGVSALYIIFK DVHVIDSFAFGASAIAFFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDTAGMGADLFESYGAT TMAAMLLGLTFAKNHGFSEVLGATFPLLLGAAGIVAAIISTFFVRTSEDGNPQMALNIGLWSTNFITAIFTYIIAQYVFG SEWAPKIFIAVVSGLVVNVAIGSLTEYYTSNLKPPAQKIAEASTTGPATNIISGIAVGMRSTYLPIIVIVAAIMVGYWAA GFYGIALAAMGMLATAAMVVAVDSFGPVADNAGGIAEMAELGPEIRNKTDKLDAVGNTTAAVAKGFAIGSAALTALALFS AYTDLAKTNPNLQKYLVNGKFDLNITDPWVLVGLFLGGTVAFLVAALTMESVGKAAFDMIEEVRRQFREIPGLMEGKARP DYARCVSISTAAAIRQMIAPGLLAVGAPLAIGFILGFKALTGYLAGVTATGVLLAIYMANAGGAWDNAKKYIEAGNLGGK GSDTHKAAVVGDTVGDPFKDTSGPAMNPLMKVAGTFALIIVPLLLF
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HPPA_CARHZ (Q3AFC6)
Other databases:
- EMBL: CP000141 - RefSeq: YP_359158.1 - STRING: Q3AFC6 - GeneID: 3726517 - GenomeReviews: CP000141_GR - KEGG: chy:CHY_0286 - NMPDR: fig|246194.3.peg.335 - TIGR: CHY_0286 - eggNOG: COG3808 - HOGENOM: HBG593668 - OMA: AYLARQY - ProtClustDB: PRK00733 - BioCyc: CHYD246194:CHY_0286-MONOMER - HAMAP: MF_01129 - InterPro: IPR004131 - PIRSF: PIRSF001265 - TIGRFAMs: TIGR01104
Pfam domain/function: PF03030 H_PPase
EC number: =3.6.1.1
Molecular weight: Translated: 71064; Mature: 71064
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe1b6a88)-; HASH(0x951ff04)-; HASH(0xff84bdc)-; HASH(0xf57504c)-; HASH(0xfa58cf0)-; HASH(0xfcd517c)-; HASH(0x106d7078)-; HASH(0xfae8f90)-; HASH(0x101836ec)-; HASH(0x109d94ec)-; HASH(0x1068acf0)-; HASH(0x1045dbf4)-; HASH(0x1053dbe8)-; HASH(0x1087b6ec)-; HASH(0x104b8f30)-; HASH(0x953a4e0)-;
Cys/Met content:
0.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENGMTLAYYGLGAGILAILFALYLFSSVLKEDMGNEKMREISQAIFEGAMAYLNRQYKT CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LIPFALVVFVLLVVGFGYKEGDFGYGLKVGVSFLVGAIASALAGYAGMTSTTKANARTTQ HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AARKSLNAALNVAFRAGGVMGMSVAGLGLLGVSALYIIFKDVHVIDSFAFGASAIAFFAR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDTAGMGADLFESYGAT HCCCCEEHHHHHCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCHH TMAAMLLGLTFAKNHGFSEVLGATFPLLLGAAGIVAAIISTFFVRTSEDGNPQMALNIGL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC WSTNFITAIFTYIIAQYVFGSEWAPKIFIAVVSGLVVNVAIGSLTEYYTSNLKPPAQKIA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH EASTTGPATNIISGIAVGMRSTYLPIIVIVAAIMVGYWAAGFYGIALAAMGMLATAAMVV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVDSFGPVADNAGGIAEMAELGPEIRNKTDKLDAVGNTTAAVAKGFAIGSAALTALALFS HHHCCCCCCCCCCCHHHHHHCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AYTDLAKTNPNLQKYLVNGKFDLNITDPWVLVGLFLGGTVAFLVAALTMESVGKAAFDMI HHHHHHHCCCCHHHHEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVRRQFREIPGLMEGKARPDYARCVSISTAAAIRQMIAPGLLAVGAPLAIGFILGFKAL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TGYLAGVTATGVLLAIYMANAGGAWDNAKKYIEAGNLGGKGSDTHKAAVVGDTVGDPFKD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC TSGPAMNPLMKVAGTFALIIVPLLLF CCCCHHHHHHHHHHHHHHHHHHHHHH >Mature Secondary Structure MENGMTLAYYGLGAGILAILFALYLFSSVLKEDMGNEKMREISQAIFEGAMAYLNRQYKT CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LIPFALVVFVLLVVGFGYKEGDFGYGLKVGVSFLVGAIASALAGYAGMTSTTKANARTTQ HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AARKSLNAALNVAFRAGGVMGMSVAGLGLLGVSALYIIFKDVHVIDSFAFGASAIAFFAR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDTAGMGADLFESYGAT HCCCCEEHHHHHCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCHH TMAAMLLGLTFAKNHGFSEVLGATFPLLLGAAGIVAAIISTFFVRTSEDGNPQMALNIGL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC WSTNFITAIFTYIIAQYVFGSEWAPKIFIAVVSGLVVNVAIGSLTEYYTSNLKPPAQKIA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH EASTTGPATNIISGIAVGMRSTYLPIIVIVAAIMVGYWAAGFYGIALAAMGMLATAAMVV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVDSFGPVADNAGGIAEMAELGPEIRNKTDKLDAVGNTTAAVAKGFAIGSAALTALALFS HHHCCCCCCCCCCCHHHHHHCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AYTDLAKTNPNLQKYLVNGKFDLNITDPWVLVGLFLGGTVAFLVAALTMESVGKAAFDMI HHHHHHHCCCCHHHHEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVRRQFREIPGLMEGKARPDYARCVSISTAAAIRQMIAPGLLAVGAPLAIGFILGFKAL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TGYLAGVTATGVLLAIYMANAGGAWDNAKKYIEAGNLGGKGSDTHKAAVVGDTVGDPFKD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC TSGPAMNPLMKVAGTFALIIVPLLLF CCCCHHHHHHHHHHHHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA