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The map label for this gene is yjiM [C]

Identifier: 78043870

GI number: 78043870

Start: 421610

End: 422875

Strand: Direct

Name: yjiM [C]

Synonym: CHY_0487

Alternate gene names: 78043870

Gene position: 421610-422875 (Clockwise)

Preceding gene: 78044819

Following gene: 78044862

Centisome position: 17.56

GC content: 43.13

Gene sequence:

>1266_bases
ATGGACAATCGGGAGTTGTGGAAGGTACTAAATGTTGATTTAGAAAAGCACGATGAATTTTTAGCCCCGGTGCCGGCGGT
TTATCGTGAGCTTTTTTTAAATCGTCCCAATCGTCCCAGGGCAATGGCTTACTTTGACGCGGTAGTGGGGGATATTCACG
GTATCCGGGTACATGAACTTTATAACTTAAAACAAGAAGGCAAAAAGGTTTTTGCTACTTTTTGCGTTTATGTACCGGAA
GAAATAATAAACGCTACCGGCAGTGCTTGCATCGGTCTTTGCGGTGGTGCTCAGTATACTGTACCGGCGGGGGAAACGGT
GTTACCGCGTAATCTCTGCCCTTTGATTAAGTCGGCGATGGGTTTTAAAATTGAAAGGATTTGTCCTTATTTTCAGGTGG
CCGACTACGTGGTTGGGGAAACTACCTGTGATGGCAAGAAAAAGGCCTGGGAGATTTTAAATGAATATATTCCAGTTTAT
GTAATGGAGTTACCTCAGAAAAAAGAAGAACGGGATCGGAAATTCTGGGAAGAGGAAATTAAAGATTTTGCGCAATTTGT
GGAAGAAAAAACGGGAGTTAAACTAAATGCAGAAAATTTAAGGGCGGGCATTGAAAAAATAAACAAAAAAAGAAAAGCTT
TAAAAAGGCTTTCCGATTTAAGAAAACACAACCCGGCTCCCATCCATGGCCTTGACGTACTGTTAATTAACCAGCTGGCC
TTTTTTGATGACCCCGAGCGTTTTGCCACAAAGGTTAATGAACTCTGCGACGAATTGGAAGAAAGGGTGGCTAAAGGCGA
AGGGGTAGTTTCCAAAGATGCTCCACGAATCTTAATTACCGGTACTCCCCAGCCCATACCCCACTGGAAAATCCATGCTT
TAATTGAAGGCGCCGGCGGTGTTGTAGTGGGTGAGGAAACCTGCATTGGGGAACGATATTTTAAAGATTTAGTAGAACCG
GCGGCGGATGTGGAAGGTATGCTTAAAAATATTGCGGCCAGGTCTTTAAAGGTAAATTGTGCCTGTTTTACCCCTAATAC
CGGCAGGCTTGAGGATATCTTATCTATGGTGCAAAAACTTCAGGTAGATGGGGTTATCCATTATTCTCTGCAGTTCTGCC
AGCCCTATGGAGTGGAAAGTTACTTAGTCGGACGGGAATTGGAGAGAAGAAATATTCCTTTCTTAAAGCTTGAAAGTGAT
TTTTCTGAAGAAGACCAGGGGCAATTAAAAACGCGGATTGAAGCCTTTTTGGAGATGATAAAGTAG

Upstream 100 bases:

>100_bases
GCCCCCGTGGACTGCAAATCCACTGGCCCGAAGTAAACCTTCGGGAGTGAGGTGTGAACCCACTTCCTCCCTCCAGATAA
AAATTAAAAGGAGGAGAGCT

Downstream 100 bases:

>100_bases
TGTTTGCAGGATTAGATTTGGGCTCAACCAACTCAAAATTGGTGATTATTAAAGAAGATGGAAGTTATACTTTTAAGGTT
GTCCCTACCAGGTATGAACC

Product: dehydratase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MDNRELWKVLNVDLEKHDEFLAPVPAVYRELFLNRPNRPRAMAYFDAVVGDIHGIRVHELYNLKQEGKKVFATFCVYVPE
EIINATGSACIGLCGGAQYTVPAGETVLPRNLCPLIKSAMGFKIERICPYFQVADYVVGETTCDGKKKAWEILNEYIPVY
VMELPQKKEERDRKFWEEEIKDFAQFVEEKTGVKLNAENLRAGIEKINKKRKALKRLSDLRKHNPAPIHGLDVLLINQLA
FFDDPERFATKVNELCDELEERVAKGEGVVSKDAPRILITGTPQPIPHWKIHALIEGAGGVVVGEETCIGERYFKDLVEP
AADVEGMLKNIAARSLKVNCACFTPNTGRLEDILSMVQKLQVDGVIHYSLQFCQPYGVESYLVGRELERRNIPFLKLESD
FSEEDQGQLKTRIEAFLEMIK

Sequences:

>Translated_421_residues
MDNRELWKVLNVDLEKHDEFLAPVPAVYRELFLNRPNRPRAMAYFDAVVGDIHGIRVHELYNLKQEGKKVFATFCVYVPE
EIINATGSACIGLCGGAQYTVPAGETVLPRNLCPLIKSAMGFKIERICPYFQVADYVVGETTCDGKKKAWEILNEYIPVY
VMELPQKKEERDRKFWEEEIKDFAQFVEEKTGVKLNAENLRAGIEKINKKRKALKRLSDLRKHNPAPIHGLDVLLINQLA
FFDDPERFATKVNELCDELEERVAKGEGVVSKDAPRILITGTPQPIPHWKIHALIEGAGGVVVGEETCIGERYFKDLVEP
AADVEGMLKNIAARSLKVNCACFTPNTGRLEDILSMVQKLQVDGVIHYSLQFCQPYGVESYLVGRELERRNIPFLKLESD
FSEEDQGQLKTRIEAFLEMIK
>Mature_421_residues
MDNRELWKVLNVDLEKHDEFLAPVPAVYRELFLNRPNRPRAMAYFDAVVGDIHGIRVHELYNLKQEGKKVFATFCVYVPE
EIINATGSACIGLCGGAQYTVPAGETVLPRNLCPLIKSAMGFKIERICPYFQVADYVVGETTCDGKKKAWEILNEYIPVY
VMELPQKKEERDRKFWEEEIKDFAQFVEEKTGVKLNAENLRAGIEKINKKRKALKRLSDLRKHNPAPIHGLDVLLINQLA
FFDDPERFATKVNELCDELEERVAKGEGVVSKDAPRILITGTPQPIPHWKIHALIEGAGGVVVGEETCIGERYFKDLVEP
AADVEGMLKNIAARSLKVNCACFTPNTGRLEDILSMVQKLQVDGVIHYSLQFCQPYGVESYLVGRELERRNIPFLKLESD
FSEEDQGQLKTRIEAFLEMIK

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiM [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=367, Percent_Identity=40.0544959128065, Blast_Score=255, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 47831; Mature: 47831

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRELWKVLNVDLEKHDEFLAPVPAVYRELFLNRPNRPRAMAYFDAVVGDIHGIRVHEL
CCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEHHHH
YNLKQEGKKVFATFCVYVPEEIINATGSACIGLCGGAQYTVPAGETVLPRNLCPLIKSAM
HHHHHHHHHHHHHHHHHCCHHHHCCCCCHHEEECCCCEEECCCCCCCCCHHHHHHHHHHH
GFKIERICPYFQVADYVVGETTCDGKKKAWEILNEYIPVYVMELPQKKEERDRKFWEEEI
CCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHH
KDFAQFVEEKTGVKLNAENLRAGIEKINKKRKALKRLSDLRKHNPAPIHGLDVLLINQLA
HHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FFDDPERFATKVNELCDELEERVAKGEGVVSKDAPRILITGTPQPIPHWKIHALIEGAGG
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCC
VVVGEETCIGERYFKDLVEPAADVEGMLKNIAARSLKVNCACFTPNTGRLEDILSMVQKL
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHH
QVDGVIHYSLQFCQPYGVESYLVGRELERRNIPFLKLESDFSEEDQGQLKTRIEAFLEMI
HHCCEEEEHHHHCCCCCCHHHHHCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
K
C
>Mature Secondary Structure
MDNRELWKVLNVDLEKHDEFLAPVPAVYRELFLNRPNRPRAMAYFDAVVGDIHGIRVHEL
CCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEHHHH
YNLKQEGKKVFATFCVYVPEEIINATGSACIGLCGGAQYTVPAGETVLPRNLCPLIKSAM
HHHHHHHHHHHHHHHHHCCHHHHCCCCCHHEEECCCCEEECCCCCCCCCHHHHHHHHHHH
GFKIERICPYFQVADYVVGETTCDGKKKAWEILNEYIPVYVMELPQKKEERDRKFWEEEI
CCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHH
KDFAQFVEEKTGVKLNAENLRAGIEKINKKRKALKRLSDLRKHNPAPIHGLDVLLINQLA
HHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FFDDPERFATKVNELCDELEERVAKGEGVVSKDAPRILITGTPQPIPHWKIHALIEGAGG
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCC
VVVGEETCIGERYFKDLVEPAADVEGMLKNIAARSLKVNCACFTPNTGRLEDILSMVQKL
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHH
QVDGVIHYSLQFCQPYGVESYLVGRELERRNIPFLKLESDFSEEDQGQLKTRIEAFLEMI
HHCCEEEEHHHHCCCCCCHHHHHCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]