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The map label for this gene is 78043854

Identifier: 78043854

GI number: 78043854

Start: 1709489

End: 1709812

Strand: Direct

Name: 78043854

Synonym: CHY_1908

Alternate gene names: NA

Gene position: 1709489-1709812 (Clockwise)

Preceding gene: 78042728

Following gene: 78044046

Centisome position: 71.18

GC content: 34.26

Gene sequence:

>324_bases
ATGAGCGGTATAAACAAGATAAAAAAACTTCGGGAAGAAAGGAAAATGAGCAGGAAAGAACTAGCAGATAAGCTTCAGAT
TTCCTACTGGGCTTTAAGTAAATATGAAAATAACGAACGCACCCCTGATATTACCCTTTTACGGAAAATTGCTCAAGAAT
TTGGAGTAAGTATTGAATACCTTGCAGGACTTTCCGACGAAAACCTTCTCCCTTCAACTTCCCCAGTAATCCAAAAAATC
CTTCAACTTCCACCTGAAGCTTTAAACGAAATCGATCTTTTTGTTGATTTTTTAAATTATAAATATAAGTTAAAAGCAAA
ATAA

Upstream 100 bases:

>100_bases
AGCACTTACGTTAAAATATTTAAAAAATAAATTTTTTTAATTTATAATATTTTTGCATCAAATAAAAATTTTAATGAAAA
GAGATGCCGGGTTGATGATT

Downstream 100 bases:

>100_bases
ACCCAAAAAAAGCACTGCAATTTAGGCGCAGTGCTTTTTGTAGCTTTTAACTTATACCCCATTACCGAGTTCAAATTTTT
TATGGATGGCATTTACCGCT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSGINKIKKLREERKMSRKELADKLQISYWALSKYENNERTPDITLLRKIAQEFGVSIEYLAGLSDENLLPSTSPVIQKI
LQLPPEALNEIDLFVDFLNYKYKLKAK

Sequences:

>Translated_107_residues
MSGINKIKKLREERKMSRKELADKLQISYWALSKYENNERTPDITLLRKIAQEFGVSIEYLAGLSDENLLPSTSPVIQKI
LQLPPEALNEIDLFVDFLNYKYKLKAK
>Mature_106_residues
SGINKIKKLREERKMSRKELADKLQISYWALSKYENNERTPDITLLRKIAQEFGVSIEYLAGLSDENLLPSTSPVIQKIL
QLPPEALNEIDLFVDFLNYKYKLKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12445; Mature: 12313

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGINKIKKLREERKMSRKELADKLQISYWALSKYENNERTPDITLLRKIAQEFGVSIEY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHH
LAGLSDENLLPSTSPVIQKILQLPPEALNEIDLFVDFLNYKYKLKAK
HHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCC
>Mature Secondary Structure 
SGINKIKKLREERKMSRKELADKLQISYWALSKYENNERTPDITLLRKIAQEFGVSIEY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHH
LAGLSDENLLPSTSPVIQKILQLPPEALNEIDLFVDFLNYKYKLKAK
HHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA