Click here to switch to the map view.

The map label for this gene is yjeA [H]

Identifier: 78043766

GI number: 78043766

Start: 1656257

End: 1656943

Strand: Direct

Name: yjeA [H]

Synonym: CHY_1849

Alternate gene names: 78043766

Gene position: 1656257-1656943 (Clockwise)

Preceding gene: 78044090

Following gene: 78043097

Centisome position: 68.97

GC content: 37.55

Gene sequence:

>687_bases
ATGGTAAACAGGTACAGAAAACTTGTTACGATTATTCTACTTCTCTTAAGTTTATTCTCGATACCTCACTTTCGGATCCT
TGGCAACATGAAAACAGTAACAAAGCCCGCACCACCTAAAAAATATTGTGCCCTGACCTTTGATGACGGTCCTGATCCGC
GCTTTACACCGCAGGTCTTAAAAATATTAAGAAAAGAAAAGATTCCAGCAACCTTTTTTGTTGTCGGCCAAAACGCTGCC
AAATACCCGGATTTAATAAAAGAAATTTATTTTCAGGGCAATGAAATTGAAAACCACACTTATACCCATCCGGTTCTTAA
TTATTTTACGGACAATACCAATTTAGATTTAGAAATCAAAAAAACCGATGCAGTGGTATATGCAAAAACTCACTATACTC
CTGCATTTTTTCGCCCACCCCGCGGGCGTCGCCCGGTTTACCTTTATAAAATTTTAGCTCGAAATAAGAAAACCCTGGTA
ATGTGGGATATTTGCGTCGAAAGTGTAATAGATAAAAAGAAAACAAATTTTTTAGTACCTAAAAATAAAGTAATAATTTT
AGCCCATGACGGCCGCCTTGACCGCAGTAAAACTATTAAAGCGCTGCCGCAGGTGATTAAACAATATAAAGATGCAGGGT
ATCAGTTTGTAACCATAAACCAGCTTCACAGTTTAGGAGTGAAATAA

Upstream 100 bases:

>100_bases
GAAATAACTCCCTAGCCTCCCTCAACCACAGGAAGGGGGTAAAACCCCTTCCTTTAAGTTAATATTATAGCAAATTAATA
TTGTTAAAGGAAAGATTTGT

Downstream 100 bases:

>100_bases
TGGACTATACAATTTTCCAGGCAATCAATAATCTTGCCGGTCATAGTATCGTATTAGATAAACTTATGATTTACATTTCC
AAATACGGCATATTTTTTTA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVNRYRKLVTIILLLLSLFSIPHFRILGNMKTVTKPAPPKKYCALTFDDGPDPRFTPQVLKILRKEKIPATFFVVGQNAA
KYPDLIKEIYFQGNEIENHTYTHPVLNYFTDNTNLDLEIKKTDAVVYAKTHYTPAFFRPPRGRRPVYLYKILARNKKTLV
MWDICVESVIDKKKTNFLVPKNKVIILAHDGRLDRSKTIKALPQVIKQYKDAGYQFVTINQLHSLGVK

Sequences:

>Translated_228_residues
MVNRYRKLVTIILLLLSLFSIPHFRILGNMKTVTKPAPPKKYCALTFDDGPDPRFTPQVLKILRKEKIPATFFVVGQNAA
KYPDLIKEIYFQGNEIENHTYTHPVLNYFTDNTNLDLEIKKTDAVVYAKTHYTPAFFRPPRGRRPVYLYKILARNKKTLV
MWDICVESVIDKKKTNFLVPKNKVIILAHDGRLDRSKTIKALPQVIKQYKDAGYQFVTINQLHSLGVK
>Mature_228_residues
MVNRYRKLVTIILLLLSLFSIPHFRILGNMKTVTKPAPPKKYCALTFDDGPDPRFTPQVLKILRKEKIPATFFVVGQNAA
KYPDLIKEIYFQGNEIENHTYTHPVLNYFTDNTNLDLEIKKTDAVVYAKTHYTPAFFRPPRGRRPVYLYKILARNKKTLV
MWDICVESVIDKKKTNFLVPKNKVIILAHDGRLDRSKTIKALPQVIKQYKDAGYQFVTINQLHSLGVK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=161, Percent_Identity=32.2981366459627, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 26422; Mature: 26422

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRYRKLVTIILLLLSLFSIPHFRILGNMKTVTKPAPPKKYCALTFDDGPDPRFTPQVL
CCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCEEEEEECCCCCCCCCHHHH
KILRKEKIPATFFVVGQNAAKYPDLIKEIYFQGNEIENHTYTHPVLNYFTDNTNLDLEIK
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEE
KTDAVVYAKTHYTPAFFRPPRGRRPVYLYKILARNKKTLVMWDICVESVIDKKKTNFLVP
CCCEEEEEECCCCCCEECCCCCCCCEEEEEEHHCCCCEEEEHHHHHHHHHHHHHCCEECC
KNKVIILAHDGRLDRSKTIKALPQVIKQYKDAGYQFVTINQLHSLGVK
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHCCCC
>Mature Secondary Structure
MVNRYRKLVTIILLLLSLFSIPHFRILGNMKTVTKPAPPKKYCALTFDDGPDPRFTPQVL
CCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCEEEEEECCCCCCCCCHHHH
KILRKEKIPATFFVVGQNAAKYPDLIKEIYFQGNEIENHTYTHPVLNYFTDNTNLDLEIK
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEE
KTDAVVYAKTHYTPAFFRPPRGRRPVYLYKILARNKKTLVMWDICVESVIDKKKTNFLVP
CCCEEEEEECCCCCCEECCCCCCCCEEEEEEHHCCCCEEEEHHHHHHHHHHHHHCCEECC
KNKVIILAHDGRLDRSKTIKALPQVIKQYKDAGYQFVTINQLHSLGVK
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]