| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043587
Identifier: 78043587
GI number: 78043587
Start: 14277
End: 14771
Strand: Direct
Name: 78043587
Synonym: CHY_0017
Alternate gene names: NA
Gene position: 14277-14771 (Clockwise)
Preceding gene: 78044734
Following gene: 78042838
Centisome position: 0.59
GC content: 38.99
Gene sequence:
>495_bases ATGCTAAATTTTACAGCTGTAATGCGGCCGGAAGTAATTTTAGGCGCATTTGGTTTAAATTTAATATTTTTTCTTTTGCT GCTTAACTTATATATAAAAACGGTTAAACTAAGACGGGAACTAAAGGATTTACTTAAAGGAAACTCCGGACAAAATCTGG AAAATATTTTACTGGATTTAGCCCGGAATAATGAGGTACTAAAAGGGGAAGTTACAAACTTAAAAAAGTATACCGAAGAA TTAAACCAAAGGCTTTTAGTGGCAGTGCAAAAAGTAGGAATGGTACGTTATAAAGCTTTACCGGACCTGGGCTCAGAGTT AAGCTTTTCGGTGGCGTTTTTAGATGCCAACAATAATGGGGTTGTAATTACCAGTCTTTACGGGCGGGAGCAGTGTCTGG TGTATGGAAAACCGGTGGAACGGGGTATTTCCACCTATCCGTTAACGGAAGAGGAACAAAAGGCAATTCGCAAAGCGATG GAAGAAGGGAGATAA
Upstream 100 bases:
>100_bases GTGAGCTTCTGCTGCGCCATACCGCACCTCCGGTTTGTTATTAATTAATTGTAGCAAATTTTCAAGACAAAAAAAACCAA GAATTACGGAGGGATTTAAA
Downstream 100 bases:
>100_bases TATGTATTTTAAAGACCGGGAGGATGCAGGTCGGGTTTGCGCTGCAAAATTATGGCAGGAAGGTATTAACGGAGATGTTA TTGCTGCAATACCCCGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLNFTAVMRPEVILGAFGLNLIFFLLLLNLYIKTVKLRRELKDLLKGNSGQNLENILLDLARNNEVLKGEVTNLKKYTEE LNQRLLVAVQKVGMVRYKALPDLGSELSFSVAFLDANNNGVVITSLYGREQCLVYGKPVERGISTYPLTEEEQKAIRKAM EEGR
Sequences:
>Translated_164_residues MLNFTAVMRPEVILGAFGLNLIFFLLLLNLYIKTVKLRRELKDLLKGNSGQNLENILLDLARNNEVLKGEVTNLKKYTEE LNQRLLVAVQKVGMVRYKALPDLGSELSFSVAFLDANNNGVVITSLYGREQCLVYGKPVERGISTYPLTEEEQKAIRKAM EEGR >Mature_164_residues MLNFTAVMRPEVILGAFGLNLIFFLLLLNLYIKTVKLRRELKDLLKGNSGQNLENILLDLARNNEVLKGEVTNLKKYTEE LNQRLLVAVQKVGMVRYKALPDLGSELSFSVAFLDANNNGVVITSLYGREQCLVYGKPVERGISTYPLTEEEQKAIRKAM EEGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18534; Mature: 18534
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFTAVMRPEVILGAFGLNLIFFLLLLNLYIKTVKLRRELKDLLKGNSGQNLENILLDL CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ARNNEVLKGEVTNLKKYTEELNQRLLVAVQKVGMVRYKALPDLGSELSFSVAFLDANNNG HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCC VVITSLYGREQCLVYGKPVERGISTYPLTEEEQKAIRKAMEEGR EEEEEECCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLNFTAVMRPEVILGAFGLNLIFFLLLLNLYIKTVKLRRELKDLLKGNSGQNLENILLDL CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ARNNEVLKGEVTNLKKYTEELNQRLLVAVQKVGMVRYKALPDLGSELSFSVAFLDANNNG HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCC VVITSLYGREQCLVYGKPVERGISTYPLTEEEQKAIRKAMEEGR EEEEEECCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA