Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78043577

Identifier: 78043577

GI number: 78043577

Start: 232334

End: 232567

Strand: Direct

Name: 78043577

Synonym: CHY_0265

Alternate gene names: NA

Gene position: 232334-232567 (Clockwise)

Preceding gene: 78044289

Following gene: 78042837

Centisome position: 9.67

GC content: 44.02

Gene sequence:

>234_bases
GTGCGCAAAACCTTTAAGGTGGGCAACAGTTTGGTAGTTTCCATTCCCCAGGAGTACGTTAAAAGCCTGGGGATTAAAGA
AGGAGATCCGCTGATTATTGAACCATGGGAACATGGTTTTATCGTTAAAACCTTTGGGGCTGTTGGAAAGGAAAGCAAGA
TACCTTCCGGAAAGAGTCCGGTAGAGAAATTACTGGAAAAATACGGGTTTGTGGTGGAGGAGTTTTCTTCATGA

Upstream 100 bases:

>100_bases
TTAGGGGTATTTAAAGTAGGTTTTGGGGATTGTTCTCCAAAGCCTATTTTTTTGTGCTATAATATATACAGTATATACAC
AGGAGGTTTTAGGGGTGAAC

Downstream 100 bases:

>100_bases
TGAATTTAAAAGAATGCTTGAATGCTTATTACCGCTATTACGGGGAAGAAAAGTTGATGGCGGTAAATGTGGATGCTTTA
GATAAAGCTTTAGCCGAGCC

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MRKTFKVGNSLVVSIPQEYVKSLGIKEGDPLIIEPWEHGFIVKTFGAVGKESKIPSGKSPVEKLLEKYGFVVEEFSS

Sequences:

>Translated_77_residues
MRKTFKVGNSLVVSIPQEYVKSLGIKEGDPLIIEPWEHGFIVKTFGAVGKESKIPSGKSPVEKLLEKYGFVVEEFSS
>Mature_77_residues
MRKTFKVGNSLVVSIPQEYVKSLGIKEGDPLIIEPWEHGFIVKTFGAVGKESKIPSGKSPVEKLLEKYGFVVEEFSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8541; Mature: 8541

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTFKVGNSLVVSIPQEYVKSLGIKEGDPLIIEPWEHGFIVKTFGAVGKESKIPSGKSP
CCCCCCCCCEEEEECCHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCH
VEKLLEKYGFVVEEFSS
HHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MRKTFKVGNSLVVSIPQEYVKSLGIKEGDPLIIEPWEHGFIVKTFGAVGKESKIPSGKSP
CCCCCCCCCEEEEECCHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCH
VEKLLEKYGFVVEEFSS
HHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA