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The map label for this gene is hgdB

Identifier: 78043556

GI number: 78043556

Start: 751847

End: 752857

Strand: Direct

Name: hgdB

Synonym: CHY_0846

Alternate gene names: NA

Gene position: 751847-752857 (Clockwise)

Preceding gene: 78042829

Following gene: 78043965

Centisome position: 31.31

GC content: 44.11

Gene sequence:

>1011_bases
ATGAAATTAAACTATTTTTGCAGTTACTGGCCGGTGGAAATATCCGAAGGAGCGGGGATTTCTACGGTCCGTTATTTCCC
GTCCGATGAAAGCAAAGCTCCGGTAAGGCTTCCTGCTTACTGCTGTTCTTATGCCAGGGGAAGCCTTGCCGAAATTGAAG
AAGAAGGAGACGGTGACTTTTGGGGATTTGCCCACAGTTGCGACACGATGCAGAGTTTATACGGCATTACTAAGAGTTTA
CTGGGAGACGACCGGGTTTTTCTTTTCGTTCCGCCGGTTGACTTAACCACCGCTTTTGCCCGGGAATACTACCGGGAAGC
TTTAATTTATCTCTGGCGGGAACTTTCCCAAAAAAGCGGGGTTAATGGTGAGGAAAAGTTAAAGCTTACCTGGGAAAAGT
TGAAGGAGTTAAGAAATAAGGTTAAATCTTTGGAAAACTTGACGTCAATTATTCCTTCCTCCGAAATTTTTGAGCTTTTA
AAAAAGCTTCAGACCCTGCCGCTGGATGAGGCTTTGGATTACCTCGAGGCCAAAAAAGCGGAATTTACCAGTTTATCTGT
GGCTCAAAAGGCTATAGGGATTATTTTAACGGGAGCGGTAGTCACTAACAGTAAACTTTACCTTGCTTTAGAACAACAGG
GATTTAGAGTAGTTTATGATGATACCTGTACCGGCTTTCGTCATTTTGCTGGAGAGATAGAGGATAAAGACGATATTTTG
GAGGCAATAGTTTCTTACTACCTTTCAAAGCCCCCCTGTCCCTGCAGGCATAAGGGAGTATGGGCGAGGGCGGAGTATTT
AAAAAATCTTTATCATAACAAAAATGCCCGGGCCATTGTACTTTTACAAAATAAATTTTGTGACCCCTTTGCCTGGGATG
TTCCCTATTTAGTGGACTACTTTAAAAAACAGGGAGTTCCGGTTTTAGTTTTAGAGGTGGAAGGCGGAGAAATCGGCGAG
CAAAATAAAACTCGCCTCCAGGCCTTCCGGGAAAGCGTGGGTGGAGTGTAA

Upstream 100 bases:

>100_bases
AAGTGCCCAAAATCATTGAAATAAAAGATGATTTACCAAAAAGCGCGATAGGTAAAATTTTGCGGAGGGCTTTAAAGGAA
ATGGAGAGTGAGGCCAGGCA

Downstream 100 bases:

>100_bases
TGGCTAAAAAAATCTTTAAGCCTCTTAAGGCTTCAGAGAAAATAAATAAAATTTTAAAAAATCATTATTTAAAAGCAAAG
TATTTGCCAACGCTTGGAAA

Product: (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta

Products: NA

Alternate protein names: 2-Hydroxyglutaryl-CoA Dehydratase Subunit Beta; (R)-2-Hydroxyglutaryl-CoA Dehydratase Subunit Beta

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKLNYFCSYWPVEISEGAGISTVRYFPSDESKAPVRLPAYCCSYARGSLAEIEEEGDGDFWGFAHSCDTMQSLYGITKSL
LGDDRVFLFVPPVDLTTAFAREYYREALIYLWRELSQKSGVNGEEKLKLTWEKLKELRNKVKSLENLTSIIPSSEIFELL
KKLQTLPLDEALDYLEAKKAEFTSLSVAQKAIGIILTGAVVTNSKLYLALEQQGFRVVYDDTCTGFRHFAGEIEDKDDIL
EAIVSYYLSKPPCPCRHKGVWARAEYLKNLYHNKNARAIVLLQNKFCDPFAWDVPYLVDYFKKQGVPVLVLEVEGGEIGE
QNKTRLQAFRESVGGV

Sequences:

>Translated_336_residues
MKLNYFCSYWPVEISEGAGISTVRYFPSDESKAPVRLPAYCCSYARGSLAEIEEEGDGDFWGFAHSCDTMQSLYGITKSL
LGDDRVFLFVPPVDLTTAFAREYYREALIYLWRELSQKSGVNGEEKLKLTWEKLKELRNKVKSLENLTSIIPSSEIFELL
KKLQTLPLDEALDYLEAKKAEFTSLSVAQKAIGIILTGAVVTNSKLYLALEQQGFRVVYDDTCTGFRHFAGEIEDKDDIL
EAIVSYYLSKPPCPCRHKGVWARAEYLKNLYHNKNARAIVLLQNKFCDPFAWDVPYLVDYFKKQGVPVLVLEVEGGEIGE
QNKTRLQAFRESVGGV
>Mature_336_residues
MKLNYFCSYWPVEISEGAGISTVRYFPSDESKAPVRLPAYCCSYARGSLAEIEEEGDGDFWGFAHSCDTMQSLYGITKSL
LGDDRVFLFVPPVDLTTAFAREYYREALIYLWRELSQKSGVNGEEKLKLTWEKLKELRNKVKSLENLTSIIPSSEIFELL
KKLQTLPLDEALDYLEAKKAEFTSLSVAQKAIGIILTGAVVTNSKLYLALEQQGFRVVYDDTCTGFRHFAGEIEDKDDIL
EAIVSYYLSKPPCPCRHKGVWARAEYLKNLYHNKNARAIVLLQNKFCDPFAWDVPYLVDYFKKQGVPVLVLEVEGGEIGE
QNKTRLQAFRESVGGV

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38118; Mature: 38118

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNYFCSYWPVEISEGAGISTVRYFPSDESKAPVRLPAYCCSYARGSLAEIEEEGDGDF
CCCCEEECCCCEEECCCCCCEEEEECCCCCCCCCEEHHHHHHHHCCCCHHHHHHCCCCCE
WGFAHSCDTMQSLYGITKSLLGDDRVFLFVPPVDLTTAFAREYYREALIYLWRELSQKSG
ECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNGEEKLKLTWEKLKELRNKVKSLENLTSIIPSSEIFELLKKLQTLPLDEALDYLEAKKA
CCCHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
EFTSLSVAQKAIGIILTGAVVTNSKLYLALEQQGFRVVYDDTCTGFRHFAGEIEDKDDIL
HHHHHHHHHHHHHHHEECEEEECCEEEEEEECCCCEEEECCCCHHHHHHHCCCCCHHHHH
EAIVSYYLSKPPCPCRHKGVWARAEYLKNLYHNKNARAIVLLQNKFCDPFAWDVPYLVDY
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
FKKQGVPVLVLEVEGGEIGEQNKTRLQAFRESVGGV
HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLNYFCSYWPVEISEGAGISTVRYFPSDESKAPVRLPAYCCSYARGSLAEIEEEGDGDF
CCCCEEECCCCEEECCCCCCEEEEECCCCCCCCCEEHHHHHHHHCCCCHHHHHHCCCCCE
WGFAHSCDTMQSLYGITKSLLGDDRVFLFVPPVDLTTAFAREYYREALIYLWRELSQKSG
ECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNGEEKLKLTWEKLKELRNKVKSLENLTSIIPSSEIFELLKKLQTLPLDEALDYLEAKKA
CCCHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
EFTSLSVAQKAIGIILTGAVVTNSKLYLALEQQGFRVVYDDTCTGFRHFAGEIEDKDDIL
HHHHHHHHHHHHHHHEECEEEECCEEEEEEECCCCEEEECCCCHHHHHHHCCCCCHHHHH
EAIVSYYLSKPPCPCRHKGVWARAEYLKNLYHNKNARAIVLLQNKFCDPFAWDVPYLVDY
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
FKKQGVPVLVLEVEGGEIGEQNKTRLQAFRESVGGV
HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA