| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043528
Identifier: 78043528
GI number: 78043528
Start: 789719
End: 790396
Strand: Direct
Name: 78043528
Synonym: CHY_0892
Alternate gene names: NA
Gene position: 789719-790396 (Clockwise)
Preceding gene: 78043794
Following gene: 78044878
Centisome position: 32.88
GC content: 37.17
Gene sequence:
>678_bases ATGATTTTGACCGAACGCCGCAAGCAATTTCTAGAGAAATTAATTGATCTATTCCAAAAAACGAATGTTCCAGTTCACTA CGAAACAATAGCGAATGCACTTGGCGTCAGCAAATGGACGGCATACGACGTTTTGAAAGAATTAGAAAAACTTGGCTACC TTACCCGGGATTATACAGTAAATCCTAACGAAATGGGACGTTCCCAGGTTGTTTTTATGCCTACTATTAAAGCTATAAAT TTGTTTGAAGAAAAACGTACAAAAGAAATAAATATAGATGAGTGGAATAAAATAAAGACAAAGGTACTTGAGCTGCTAAA CAGTTTAAAAACTCACAGCATTAGTGATGCTGTACAAAAAATGCTGGAGGAAATTCCAAAGGTTCAGGTACGAGTAACTT TTGGGGCATATGTCATAGGGTTATTTATCGTGTATCTTAGAAAATTGGGCGGAAGAACAGAAATGCTGGTTAAAAGTTTG GTTCAAAATGCACCTACCAGTGAAATGCGCATCATAATCTTTATTGGAACTGTTCTTGGTACTATTATTCAAACGATGAA TCATGAGATAGGGGTTGGGGTAACCGAGTTAGTCGGAAGGTATTTAAAGTCGCTTACCGATCTTTCTGATAAGGAAAAGG GTATGCTTGCGGATTTTCTTGTTGAAGCTTTAGCTTGA
Upstream 100 bases:
>100_bases ACAGATTAATAACAAAGGATACCTAAATTCTTGACATATTTTAAAATTGAAAATAGAATAATACTCGTAAACTATTTTGG TTTTTTGGGGGTAGCTAAGT
Downstream 100 bases:
>100_bases AATTGGTCACAAATTTAAGTTACGACCTTTTTATTTTACCAAGTTTTTTGGTTTTTTGGGTATATATGTAGATTATTTGT TTGGTGAGATGGGAAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Iron Dependent Repressor; Transscriptional Regulator
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MILTERRKQFLEKLIDLFQKTNVPVHYETIANALGVSKWTAYDVLKELEKLGYLTRDYTVNPNEMGRSQVVFMPTIKAIN LFEEKRTKEINIDEWNKIKTKVLELLNSLKTHSISDAVQKMLEEIPKVQVRVTFGAYVIGLFIVYLRKLGGRTEMLVKSL VQNAPTSEMRIIIFIGTVLGTIIQTMNHEIGVGVTELVGRYLKSLTDLSDKEKGMLADFLVEALA
Sequences:
>Translated_225_residues MILTERRKQFLEKLIDLFQKTNVPVHYETIANALGVSKWTAYDVLKELEKLGYLTRDYTVNPNEMGRSQVVFMPTIKAIN LFEEKRTKEINIDEWNKIKTKVLELLNSLKTHSISDAVQKMLEEIPKVQVRVTFGAYVIGLFIVYLRKLGGRTEMLVKSL VQNAPTSEMRIIIFIGTVLGTIIQTMNHEIGVGVTELVGRYLKSLTDLSDKEKGMLADFLVEALA >Mature_225_residues MILTERRKQFLEKLIDLFQKTNVPVHYETIANALGVSKWTAYDVLKELEKLGYLTRDYTVNPNEMGRSQVVFMPTIKAIN LFEEKRTKEINIDEWNKIKTKVLELLNSLKTHSISDAVQKMLEEIPKVQVRVTFGAYVIGLFIVYLRKLGGRTEMLVKSL VQNAPTSEMRIIIFIGTVLGTIIQTMNHEIGVGVTELVGRYLKSLTDLSDKEKGMLADFLVEALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25651; Mature: 25651
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTERRKQFLEKLIDLFQKTNVPVHYETIANALGVSKWTAYDVLKELEKLGYLTRDYTV CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHCCCCC NPNEMGRSQVVFMPTIKAINLFEEKRTKEINIDEWNKIKTKVLELLNSLKTHSISDAVQK CHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH MLEEIPKVQVRVTFGAYVIGLFIVYLRKLGGRTEMLVKSLVQNAPTSEMRIIIFIGTVLG HHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEHHHHHHHHH TIIQTMNHEIGVGVTELVGRYLKSLTDLSDKEKGMLADFLVEALA HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHC >Mature Secondary Structure MILTERRKQFLEKLIDLFQKTNVPVHYETIANALGVSKWTAYDVLKELEKLGYLTRDYTV CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHCCCCC NPNEMGRSQVVFMPTIKAINLFEEKRTKEINIDEWNKIKTKVLELLNSLKTHSISDAVQK CHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH MLEEIPKVQVRVTFGAYVIGLFIVYLRKLGGRTEMLVKSLVQNAPTSEMRIIIFIGTVLG HHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEHHHHHHHHH TIIQTMNHEIGVGVTELVGRYLKSLTDLSDKEKGMLADFLVEALA HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA