| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043469
Identifier: 78043469
GI number: 78043469
Start: 199655
End: 201406
Strand: Direct
Name: 78043469
Synonym: CHY_0233
Alternate gene names: NA
Gene position: 199655-201406 (Clockwise)
Preceding gene: 78043552
Following gene: 78042881
Centisome position: 8.31
GC content: 44.52
Gene sequence:
>1752_bases ATGAGGAGGAAGAGTTTAGTTATTTTGCTGCTGGCAGTGTTTGTACTTTTATTTAGCGGTACTACCCTGGCTGCAGATCA TTCGCAGGGCAAAGATTGTTTATCGTGTCACCAGAAATATGATCACTCCAGGCTGCAAAAGTACGAGGGATCAAAAAACT GTTTACCCTGCCATTCCGACCAGGTAAACGATGTTATCCACTCGGACCACTATACCTGGCAGAGCAAACCGGTAAACCTG ATTGATGCTGCCGGTAAGCCCTGGCCCGCCGATAAGCCGGTAGGGAAACTTGGGGGCTTAAACGATTTCTGCATTACCCC GGATATTAACTTCCTGGGAATTTTAGTTAATAAGAACGGGGCTAATGTCAAAGGTGGCTGTGGCCAGTGCCACGTAGGTA TGGGTTCAAGGCCGGATAAAATTGATGAGGCAAAAGATAAGGAAAACGTTGACTGTTTAATTTGCCATGCCGATTATTCG GTATACAACAGGAACCTGAAAACTATTGTGCAGGATGCATATGGTAACTTGTATTACATTCCTAATACCTCGGTAATTGA TATTGCCTATGTGAAAAAAGCAAACGTTTCTGGAACGGTTGATATTACAGCAGCCCTAAAATCAATTAAGAAGACCCCCG ATAATAAAAACTGCCTCCAGTGCCATGCTTTTGCTGGCGGTGGCCCCAACAACAAGCGGGGAGATTTAGAACCCATCCTG ATGACCGAGCCTGCCAAAGTAGATGTTCATATGGGTAGTGGGATGAAATGTGTTGACTGCCATAAGACCGAAAACCACAA AATAGCCGGCCGTGGGGTAGATTTACGGACTAACGAATTAAATTATAATGTACGGTGTGAAAATTGCCACTCTACTAAGG TCCATAAAGGTCCTCTGGGAGTGGCCTTGAACAATCACGTCAAGAGCATCGACTGCACTACCTGTCACGTACCGGAATAC GCAATTACCCAGTCTACTGATGTTTTCCGGGATTGGTCACAGGCGGAATACAATAGTGTAACCGCCCTCTATGAGCCCAA AATAGAACGGGGACAAAATTTAAAGCCAGTATATCTCTGGTGGAATGGCCTTTCTTACGCCCAGCAAACTGATGTACCGG CGGTATTTAATAAAGATAACAAATATGCTCCTAATAAAACAACTAAACCCGATTACGTAACTTTATTTGCACCGGTTGGC TCAATAAACGATCCCAAGGCCAAGATTTATCCCTTCCGCTACCACTATGCTTATATGCCTATTGACCCGGTCACTGGTAA GTTCTTCCCGGCTAAAGCTGGTTACGTATTTATGACCGGCGATGTTTTGGGTGGATTTACTAAAGGCTATAAAGAATGGT TTGGCGTGGATTTGGTAAGTCCGGTTAAGTGGGTCTATGCCGAGCGGTACATGGGCTTGTATCATGAAGTGAAGCCCGCA AGTCAGGCGCTCTCCTGCACCAGCTGCCACAGTAACCGGGGAGTTCTTAACTGGAAAGCTTTAGGATATAAAGGCGATCC AATTATTTATGGTGCGAGAAAGGTTGTAACAACTCCGGCAGTTAAAACCTATACGGTAACCAAGACCACTTATCTCTACC AGACCGCATCTACCAAAGCCAAGAAACTAACCACACTGAAGGCTGGTACTAAAGTAACTTATGTAAGTGCTTCGGGCAAC TACTATAAAGTCCAGGTAAAAGTTGGTTCCAAAACTTATACTGGCTATGTTTTAAAGTCTTATCTCAAGTAA
Upstream 100 bases:
>100_bases ACATTATATGCTTTAATTCCGGGGAGCTGGGCTATAAGTAAAACTTAGTGCTTGCCTTGCGTTTCCCGGCTTTAATAAAA ATACAAGGAGAGGTGATGTG
Downstream 100 bases:
>100_bases GTCCAAGGAAAGAAAAGGATAAGAGAGGGGTTAACAGCCCCTCTTTTCTTTAGCAGCAATTAGCATTAAACCCATAAAAA AGTGTTGGCATAAAAGGAAT
Product: putative cytochrome c
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MRRKSLVILLLAVFVLLFSGTTLAADHSQGKDCLSCHQKYDHSRLQKYEGSKNCLPCHSDQVNDVIHSDHYTWQSKPVNL IDAAGKPWPADKPVGKLGGLNDFCITPDINFLGILVNKNGANVKGGCGQCHVGMGSRPDKIDEAKDKENVDCLICHADYS VYNRNLKTIVQDAYGNLYYIPNTSVIDIAYVKKANVSGTVDITAALKSIKKTPDNKNCLQCHAFAGGGPNNKRGDLEPIL MTEPAKVDVHMGSGMKCVDCHKTENHKIAGRGVDLRTNELNYNVRCENCHSTKVHKGPLGVALNNHVKSIDCTTCHVPEY AITQSTDVFRDWSQAEYNSVTALYEPKIERGQNLKPVYLWWNGLSYAQQTDVPAVFNKDNKYAPNKTTKPDYVTLFAPVG SINDPKAKIYPFRYHYAYMPIDPVTGKFFPAKAGYVFMTGDVLGGFTKGYKEWFGVDLVSPVKWVYAERYMGLYHEVKPA SQALSCTSCHSNRGVLNWKALGYKGDPIIYGARKVVTTPAVKTYTVTKTTYLYQTASTKAKKLTTLKAGTKVTYVSASGN YYKVQVKVGSKTYTGYVLKSYLK
Sequences:
>Translated_583_residues MRRKSLVILLLAVFVLLFSGTTLAADHSQGKDCLSCHQKYDHSRLQKYEGSKNCLPCHSDQVNDVIHSDHYTWQSKPVNL IDAAGKPWPADKPVGKLGGLNDFCITPDINFLGILVNKNGANVKGGCGQCHVGMGSRPDKIDEAKDKENVDCLICHADYS VYNRNLKTIVQDAYGNLYYIPNTSVIDIAYVKKANVSGTVDITAALKSIKKTPDNKNCLQCHAFAGGGPNNKRGDLEPIL MTEPAKVDVHMGSGMKCVDCHKTENHKIAGRGVDLRTNELNYNVRCENCHSTKVHKGPLGVALNNHVKSIDCTTCHVPEY AITQSTDVFRDWSQAEYNSVTALYEPKIERGQNLKPVYLWWNGLSYAQQTDVPAVFNKDNKYAPNKTTKPDYVTLFAPVG SINDPKAKIYPFRYHYAYMPIDPVTGKFFPAKAGYVFMTGDVLGGFTKGYKEWFGVDLVSPVKWVYAERYMGLYHEVKPA SQALSCTSCHSNRGVLNWKALGYKGDPIIYGARKVVTTPAVKTYTVTKTTYLYQTASTKAKKLTTLKAGTKVTYVSASGN YYKVQVKVGSKTYTGYVLKSYLK >Mature_583_residues MRRKSLVILLLAVFVLLFSGTTLAADHSQGKDCLSCHQKYDHSRLQKYEGSKNCLPCHSDQVNDVIHSDHYTWQSKPVNL IDAAGKPWPADKPVGKLGGLNDFCITPDINFLGILVNKNGANVKGGCGQCHVGMGSRPDKIDEAKDKENVDCLICHADYS VYNRNLKTIVQDAYGNLYYIPNTSVIDIAYVKKANVSGTVDITAALKSIKKTPDNKNCLQCHAFAGGGPNNKRGDLEPIL MTEPAKVDVHMGSGMKCVDCHKTENHKIAGRGVDLRTNELNYNVRCENCHSTKVHKGPLGVALNNHVKSIDCTTCHVPEY AITQSTDVFRDWSQAEYNSVTALYEPKIERGQNLKPVYLWWNGLSYAQQTDVPAVFNKDNKYAPNKTTKPDYVTLFAPVG SINDPKAKIYPFRYHYAYMPIDPVTGKFFPAKAGYVFMTGDVLGGFTKGYKEWFGVDLVSPVKWVYAERYMGLYHEVKPA SQALSCTSCHSNRGVLNWKALGYKGDPIIYGARKVVTTPAVKTYTVTKTTYLYQTASTKAKKLTTLKAGTKVTYVSASGN YYKVQVKVGSKTYTGYVLKSYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023155 - InterPro: IPR011031 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64673; Mature: 64673
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKSLVILLLAVFVLLFSGTTLAADHSQGKDCLSCHQKYDHSRLQKYEGSKNCLPCHSD CCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCC QVNDVIHSDHYTWQSKPVNLIDAAGKPWPADKPVGKLGGLNDFCITPDINFLGILVNKNG HHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCHHHCCCCCEEECCCCCEEEEEEECCC ANVKGGCGQCHVGMGSRPDKIDEAKDKENVDCLICHADYSVYNRNLKTIVQDAYGNLYYI CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHCCCEEEC PNTSVIDIAYVKKANVSGTVDITAALKSIKKTPDNKNCLQCHAFAGGGPNNKRGDLEPIL CCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEE MTEPAKVDVHMGSGMKCVDCHKTENHKIAGRGVDLRTNELNYNVRCENCHSTKVHKGPLG EECCCEEEEECCCCCEEEECCCCCCCEEECCCCEEEECCCEEEEEECCCCCCCEECCCCE VALNNHVKSIDCTTCHVPEYAITQSTDVFRDWSQAEYNSVTALYEPKIERGQNLKPVYLW EEECCCCCEEEEEEEECCCEEECCCCHHHHCCCCCCCCCEEEEECCHHHCCCCCCEEEEE WNGLSYAQQTDVPAVFNKDNKYAPNKTTKPDYVTLFAPVGSINDPKAKIYPFRYHYAYMP ECCCCCCHHCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEC IDPVTGKFFPAKAGYVFMTGDVLGGFTKGYKEWFGVDLVSPVKWVYAERYMGLYHEVKPA CCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH SQALSCTSCHSNRGVLNWKALGYKGDPIIYGARKVVTTPAVKTYTVTKTTYLYQTASTKA HHHEEEECCCCCCCEEEEEEECCCCCEEEECCEEEEECCCEEEEEEEEEEEEEEECCCCH KKLTTLKAGTKVTYVSASGNYYKVQVKVGSKTYTGYVLKSYLK HEEEEEECCCEEEEEECCCCEEEEEEEECCEEEHHHHHHHHCC >Mature Secondary Structure MRRKSLVILLLAVFVLLFSGTTLAADHSQGKDCLSCHQKYDHSRLQKYEGSKNCLPCHSD CCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCC QVNDVIHSDHYTWQSKPVNLIDAAGKPWPADKPVGKLGGLNDFCITPDINFLGILVNKNG HHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCHHHCCCCCEEECCCCCEEEEEEECCC ANVKGGCGQCHVGMGSRPDKIDEAKDKENVDCLICHADYSVYNRNLKTIVQDAYGNLYYI CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHCCCEEEC PNTSVIDIAYVKKANVSGTVDITAALKSIKKTPDNKNCLQCHAFAGGGPNNKRGDLEPIL CCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEE MTEPAKVDVHMGSGMKCVDCHKTENHKIAGRGVDLRTNELNYNVRCENCHSTKVHKGPLG EECCCEEEEECCCCCEEEECCCCCCCEEECCCCEEEECCCEEEEEECCCCCCCEECCCCE VALNNHVKSIDCTTCHVPEYAITQSTDVFRDWSQAEYNSVTALYEPKIERGQNLKPVYLW EEECCCCCEEEEEEEECCCEEECCCCHHHHCCCCCCCCCEEEEECCHHHCCCCCCEEEEE WNGLSYAQQTDVPAVFNKDNKYAPNKTTKPDYVTLFAPVGSINDPKAKIYPFRYHYAYMP ECCCCCCHHCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEC IDPVTGKFFPAKAGYVFMTGDVLGGFTKGYKEWFGVDLVSPVKWVYAERYMGLYHEVKPA CCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH SQALSCTSCHSNRGVLNWKALGYKGDPIIYGARKVVTTPAVKTYTVTKTTYLYQTASTKA HHHEEEECCCCCCCEEEEEEECCCCCEEEECCEEEEECCCEEEEEEEEEEEEEEECCCCH KKLTTLKAGTKVTYVSASGNYYKVQVKVGSKTYTGYVLKSYLK HEEEEEECCCEEEEEECCCCEEEEEEEECCEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]