| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yqfN [H]
Identifier: 78043325
GI number: 78043325
Start: 400865
End: 401563
Strand: Direct
Name: yqfN [H]
Synonym: CHY_0459
Alternate gene names: 78043325
Gene position: 400865-401563 (Clockwise)
Preceding gene: 78044024
Following gene: 78043187
Centisome position: 16.69
GC content: 39.77
Gene sequence:
>699_bases ATGGAGTTAACGGAAAGGTTAAAAGCGTTAGCAAAACACGTAATTACCGGTGAACCTGCGGCTGATATTGGTACGGACCA TGCAAAATTACCAATTTATTTAGTAATCCACAATATCTGTCCAAAAGTAATTGCTACCGATTTAAATGAAATGCCACTGA ATCACGCTCAGAGTGAAGTTAGAGAATACGGGCTTTTGGAAAAAATTGAGTTAAGACAGGGAGACGGGTTATCTCCTTTA AAACCGGGGGAAGTTAAAAGTGTGGTAATTGCGGGTATGGGTGGGAATACTATTGCGCGGATTATCGAAGGTCGACCGGA AATTGCCCGGGAAGTTCGCCTTATCCTGCAACCGATGACGGATAGTTATGCTTTACGCTTAAAACTGGTGTCAAGAGGTT ACCGGATTATTGCCGAGGAACTGGTGGAAGAAAAAAGCAGACTTTACGAAGTTATTGTTGCTGAGGCCGGTAAAATGGAG AATTTAGATAAAGTTGAAATTGGCTTAGGACCGGTTTTGCTTAAGAATAGGGATGAACTTACAAGAAAATATTTAACAGG GCAAAAAGAAAAATACCGGAAAATCCTGATTAATTTACAAAAGGCGCAAGTGAAAGATTTAGAAAAGGTTAGGGAAATTA GTGAGATTTTAAATTATCTTAAGGAGGTGTTAAAAAGTTGGCCCATCCGCAGGAAATAG
Upstream 100 bases:
>100_bases GGTTTGGGGTTTTTTGTTTTTACTACCTTTTTTGGGGAAGATGCTGTATAATTATTGAAAATATAATTAAACATATTTAA AAAGTTACTCAGGAGGAAAA
Downstream 100 bases:
>100_bases CGGCGGTTATAGAAGAAAAATTTCCACGGAAATTGGCAATGGAGTGGGATAATCCCGGCTGGCAGATTTATTTTGAAAAA GAAGTACATAAGGTCTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEVREYGLLEKIELRQGDGLSPL KPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMTDSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKME NLDKVEIGLGPVLLKNRDELTRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK
Sequences:
>Translated_232_residues MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEVREYGLLEKIELRQGDGLSPL KPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMTDSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKME NLDKVEIGLGPVLLKNRDELTRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK >Mature_232_residues MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEVREYGLLEKIELRQGDGLSPL KPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMTDSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKME NLDKVEIGLGPVLLKNRDELTRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK
Specific function: Unknown
COG id: COG2384
COG function: function code R; Predicted SAM-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006901 [H]
Pfam domain/function: PF04816 DUF633 [H]
EC number: NA
Molecular weight: Translated: 26333; Mature: 26333
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEV CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHH REYGLLEKIELRQGDGLSPLKPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMT HHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCC DSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKMENLDKVEIGLGPVLLKNRDEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCHHHH TRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEV CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHH REYGLLEKIELRQGDGLSPLKPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMT HHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCC DSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKMENLDKVEIGLGPVLLKNRDEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCHHHH TRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]