| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043281
Identifier: 78043281
GI number: 78043281
Start: 2100742
End: 2101137
Strand: Direct
Name: 78043281
Synonym: CHY_2345
Alternate gene names: NA
Gene position: 2100742-2101137 (Clockwise)
Preceding gene: 78042691
Following gene: 78043217
Centisome position: 87.48
GC content: 37.37
Gene sequence:
>396_bases ATGAAAGATTTATTAATTGACCATTTCCAGGAAACGGTGAACGAATTGTTAATACGACATAAAAGCATTTTGGATGTTTT ATCAAAATTAAACGAAGCCTCCGCACGCGTTCACCGGGCTACTGTCAAAGCGGTAACCCAATGCGGTTGCTTAAAAATAG ACGCCAAAAAACCTATTATTCCGGAAGATGCCACCATCCTGCAGCTTAAAGAAATTTTTGACACCCACTTAAAAGGAGAA CTCTGTCCAAACTGCAAAGACACCATTGAAAAAGAAATGGGGAGGCTTTTATTTTACCTGACGGCTCTTTGCAATCATTT AGACATAAATCTCTATGATGTGTTTATAAAAGAACAAAAAGCCCTGGATACCTTGAATATCTTTAACTTTACGTAA
Upstream 100 bases:
>100_bases TATTTTATCACAACCCTTTTAAAAATGTCAACAAGGCCGAATCATTTGACAAGGAGGCAGGGCAAAATTATAATTTATGG TAGTAAAGGGAGGGGACCCG
Downstream 100 bases:
>100_bases AAAACCGTAGCTTTACGCTACGGTTTTATAGTGTATAGTTTGTTTGTTCTCTTAATTTTTTAAGCCCCTCTTTAATCGAA CGCGCCCTTACCTCGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKDLLIDHFQETVNELLIRHKSILDVLSKLNEASARVHRATVKAVTQCGCLKIDAKKPIIPEDATILQLKEIFDTHLKGE LCPNCKDTIEKEMGRLLFYLTALCNHLDINLYDVFIKEQKALDTLNIFNFT
Sequences:
>Translated_131_residues MKDLLIDHFQETVNELLIRHKSILDVLSKLNEASARVHRATVKAVTQCGCLKIDAKKPIIPEDATILQLKEIFDTHLKGE LCPNCKDTIEKEMGRLLFYLTALCNHLDINLYDVFIKEQKALDTLNIFNFT >Mature_131_residues MKDLLIDHFQETVNELLIRHKSILDVLSKLNEASARVHRATVKAVTQCGCLKIDAKKPIIPEDATILQLKEIFDTHLKGE LCPNCKDTIEKEMGRLLFYLTALCNHLDINLYDVFIKEQKALDTLNIFNFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15025; Mature: 15025
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLLIDHFQETVNELLIRHKSILDVLSKLNEASARVHRATVKAVTQCGCLKIDAKKPII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC PEDATILQLKEIFDTHLKGELCPNCKDTIEKEMGRLLFYLTALCNHLDINLYDVFIKEQK CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ALDTLNIFNFT HHHHHHHCCCC >Mature Secondary Structure MKDLLIDHFQETVNELLIRHKSILDVLSKLNEASARVHRATVKAVTQCGCLKIDAKKPII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC PEDATILQLKEIFDTHLKGELCPNCKDTIEKEMGRLLFYLTALCNHLDINLYDVFIKEQK CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ALDTLNIFNFT HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA