| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is hflX [H]
Identifier: 78043216
GI number: 78043216
Start: 95212
End: 96456
Strand: Direct
Name: hflX [H]
Synonym: CHY_0112
Alternate gene names: 78043216
Gene position: 95212-96456 (Clockwise)
Preceding gene: 78043371
Following gene: 78044882
Centisome position: 3.96
GC content: 46.99
Gene sequence:
>1245_bases GTGGAAAAAGCTTTAGTGGCTTTTTTAGTTGAAAACCTGAAAAAATTTCCCTACCAAAAGGAAGAGTTTTTAGCCCTCCT GAAAACCCGCGGGATTGAGGCTGTTGATATTATAAGCCAAAGGCTTGAGCATCCGGTTCCTGCCACTTATTTTGGCTACG GGAAGGTGCAGGAAATAGGAGAACTCTTAAAAAAACACAATTTAAATTTGCTGGCGGTGGGGGGAGATTTAACACCTACC CAGGCCAAAAACCTGGAAGAAATTCTGGAAGTTACGGTGGTGGATCGCACCCAGATTATCCTGGAAATTTTTGCCGAGCA TGCCCACACCCATGAGGGGAAAATTCAGGTGGAGTTGGCCCGGCTTATGTATAACCTTCCCCGGATTACCGGGCTCGGAC GGGTTTTGTCCCGCCTTGGGGGCGGTATTGGTACCCGGGGTCCCGGAGAGACCAAACTGGAGGTCCTGCGGCGGACTATT CGGAAAAGGATTGCCGAGTTGCGCCGGGAGTTAAAAGAAATTGAACAAAACCGGAAAGTCAAAAGGTCCCGGCGGTTGGA GGCGGGAGTGCCAATCGTAGCCCTGGTGGGGTATACCAATGCGGGTAAATCTACTTTACTTAATGCCCTTACCGGGGCGG GAGTGCTGGCGGAAGACAAACTCTTTGCCACTTTAGATCCTACGGTTAGAAAGCTAACTTTGCCCGGAGGGCAGAAGCTT CTTTTAATTGATACGGTGGGTTTTATTGAAAATATGCCACCCCTGATTAAAGAAGCGTTTAAATCGACTCTGGAGGTAGT GCATGAAGCAGAGTTAATTTTGCATGTGGTGGATGGGGCAAACCCATACCGGGAAGAGCAGGAAGCGGTGGTTGAAAAAA TTCTAACGGAAATGAAAGTAAGAGTGCCGGTAATTACCGTTTATAATAAAGTGGATCTTTTGCCGGAACCGGTTTTGTTT TTGGGTAAAAGGGCGGTTGCGATTTCTGCCCGTACCGGCTATAACATGGAGCTACTTTTAAAATTAATAGAGGAAAACTT ATTCTGGCAGGAAGTTACGGTGAAAGCCGTTTTGCCCTTTGCCCAGGCTTTTAAAATTGGGGATTTAAAAGAAAACTTAA AGCTTATAAATTTAGAGTATTTACCGGAAGGAATTGAGGTTACCGTTGCCGGTCCCCGGGAAAGAATAGCGAGGTACTTA GGAAGGGAAAAGCTGGAGGAGAGCAATGGCGAAAAGCCGGTATGA
Upstream 100 bases:
>100_bases TATTTACGAAAGAGATTTGGAAATATCTTAAAAAAGTTTTAGCTTTTAGTCAAGAAAAATTTATTTGTGGTATAATGGTC AAAAAACCGGGGGGGTTATT
Downstream 100 bases:
>100_bases CGTTAACGAAAGAGTATTTTGGCTGATTTACGGCATGGCGCGAAAGAATATTTATTTAGACAAGGTTATGGTCTTTTTTT CCCGCGGGGGAATTTATTTT
Product: GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MEKALVAFLVENLKKFPYQKEEFLALLKTRGIEAVDIISQRLEHPVPATYFGYGKVQEIGELLKKHNLNLLAVGGDLTPT QAKNLEEILEVTVVDRTQIILEIFAEHAHTHEGKIQVELARLMYNLPRITGLGRVLSRLGGGIGTRGPGETKLEVLRRTI RKRIAELRRELKEIEQNRKVKRSRRLEAGVPIVALVGYTNAGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKL LLIDTVGFIENMPPLIKEAFKSTLEVVHEAELILHVVDGANPYREEQEAVVEKILTEMKVRVPVITVYNKVDLLPEPVLF LGKRAVAISARTGYNMELLLKLIEENLFWQEVTVKAVLPFAQAFKIGDLKENLKLINLEYLPEGIEVTVAGPRERIARYL GREKLEESNGEKPV
Sequences:
>Translated_414_residues MEKALVAFLVENLKKFPYQKEEFLALLKTRGIEAVDIISQRLEHPVPATYFGYGKVQEIGELLKKHNLNLLAVGGDLTPT QAKNLEEILEVTVVDRTQIILEIFAEHAHTHEGKIQVELARLMYNLPRITGLGRVLSRLGGGIGTRGPGETKLEVLRRTI RKRIAELRRELKEIEQNRKVKRSRRLEAGVPIVALVGYTNAGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKL LLIDTVGFIENMPPLIKEAFKSTLEVVHEAELILHVVDGANPYREEQEAVVEKILTEMKVRVPVITVYNKVDLLPEPVLF LGKRAVAISARTGYNMELLLKLIEENLFWQEVTVKAVLPFAQAFKIGDLKENLKLINLEYLPEGIEVTVAGPRERIARYL GREKLEESNGEKPV >Mature_414_residues MEKALVAFLVENLKKFPYQKEEFLALLKTRGIEAVDIISQRLEHPVPATYFGYGKVQEIGELLKKHNLNLLAVGGDLTPT QAKNLEEILEVTVVDRTQIILEIFAEHAHTHEGKIQVELARLMYNLPRITGLGRVLSRLGGGIGTRGPGETKLEVLRRTI RKRIAELRRELKEIEQNRKVKRSRRLEAGVPIVALVGYTNAGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKL LLIDTVGFIENMPPLIKEAFKSTLEVVHEAELILHVVDGANPYREEQEAVVEKILTEMKVRVPVITVYNKVDLLPEPVLF LGKRAVAISARTGYNMELLLKLIEENLFWQEVTVKAVLPFAQAFKIGDLKENLKLINLEYLPEGIEVTVAGPRERIARYL GREKLEESNGEKPV
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=228, Percent_Identity=35.9649122807018, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI310133116, Length=219, Percent_Identity=36.0730593607306, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI310124269, Length=201, Percent_Identity=36.81592039801, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI310124267, Length=201, Percent_Identity=36.81592039801, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI310124171, Length=201, Percent_Identity=36.81592039801, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI310124169, Length=201, Percent_Identity=36.81592039801, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1790615, Length=334, Percent_Identity=41.9161676646707, Blast_Score=248, Evalue=8e-67, Organism=Caenorhabditis elegans, GI17561038, Length=345, Percent_Identity=31.304347826087, Blast_Score=138, Evalue=7e-33, Organism=Drosophila melanogaster, GI24650079, Length=317, Percent_Identity=33.1230283911672, Blast_Score=145, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 46384; Mature: 46384
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKALVAFLVENLKKFPYQKEEFLALLKTRGIEAVDIISQRLEHPVPATYFGYGKVQEIG CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCHHHHH ELLKKHNLNLLAVGGDLTPTQAKNLEEILEVTVVDRTQIILEIFAEHAHTHEGKIQVELA HHHHHCCCCEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH RLMYNLPRITGLGRVLSRLGGGIGTRGPGETKLEVLRRTIRKRIAELRRELKEIEQNRKV HHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRSRRLEAGVPIVALVGYTNAGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKL HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEECCCEEEECCCHHHEEECCCCCEE LLIDTVGFIENMPPLIKEAFKSTLEVVHEAELILHVVDGANPYREEQEAVVEKILTEMKV EEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH RVPVITVYNKVDLLPEPVLFLGKRAVAISARTGYNMELLLKLIEENLFWQEVTVKAVLPF HCCEEEEECHHCCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AQAFKIGDLKENLKLINLEYLPEGIEVTVAGPRERIARYLGREKLEESNGEKPV HHHHHCCCHHHCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEKALVAFLVENLKKFPYQKEEFLALLKTRGIEAVDIISQRLEHPVPATYFGYGKVQEIG CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCHHHHH ELLKKHNLNLLAVGGDLTPTQAKNLEEILEVTVVDRTQIILEIFAEHAHTHEGKIQVELA HHHHHCCCCEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH RLMYNLPRITGLGRVLSRLGGGIGTRGPGETKLEVLRRTIRKRIAELRRELKEIEQNRKV HHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRSRRLEAGVPIVALVGYTNAGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKL HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEECCCEEEECCCHHHEEECCCCCEE LLIDTVGFIENMPPLIKEAFKSTLEVVHEAELILHVVDGANPYREEQEAVVEKILTEMKV EEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH RVPVITVYNKVDLLPEPVLFLGKRAVAISARTGYNMELLLKLIEENLFWQEVTVKAVLPF HCCEEEEECHHCCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AQAFKIGDLKENLKLINLEYLPEGIEVTVAGPRERIARYLGREKLEESNGEKPV HHHHHCCCHHHCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]